Scomber scombrus (Atlantic mackerel): 133979457
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Entry
133979457 CDS
T10651
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133979457 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133979457 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
133979457 (pdlim2)
BRITE hierarchy
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
PAAR_motif
Motif
Other DBs
NCBI-GeneID:
133979457
NCBI-ProteinID:
XP_062273956
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All DBs
Position
4:11354154..11390965
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AA seq
365 aa
AA seq
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MALTVNLIGPSPWGFRIFGGRDFKKAITVSKVNGGSKAEQAALQPGDIILEINGENTADM
LNVEAQNKIKNSKTHLQLAVQRIGFSSPGQTNGINSPEQLTGRFQETVIVSRDENQNYRE
YTISSPASLSPGPYSPDPPASPDGKRERLTPTINKSVQLRSWSPDEKSQRLSRPLSQDFS
SSDYRNNSSRTPTPPGRYSPHSPIDRDIPMSPRRSSTSSDFAMQRFDRDSEVYKMIQENK
ESRTAPRQSNTFKMLQEVLEADEKGAALKFPGKLSPNVPIPSAPVAGVNKYHTCEKCGTS
IVTQAVRITDDHFRHPECYTCTDCGLNLRMRGHFWVGDVMYCEKHAKQRYQGPGSSPQTT
VSPRQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcactgacggtgaatctgatcggtccttcaccatggggcttcagaatattcggaggg
agggacttcaagaaggccataactgtatcgaaggtcaatgggggcagcaaggcagagcag
gcagccctgcaacctggtgacattatcttggagatcaacggggaaaacacggccgacatg
ttgaacgtggaggctcagaacaagatcaagaattccaagacccatctgcagctggcggtg
cagagaattggattttccagccctggacagacaaatggcatcaacagccctgaacagctc
actggacgcttccaggagacagtaatagtgagtcgagatgagaaccagaactacagagag
tacaccatttccagccctgcatcactgtcccctggaccttattcaccagatcctcctgcc
agccctgacgggaagagagagaggctgacaccaaccatcaacaagagtgtccagctgcgc
tcatggtctccagatgagaagagtcagaggctgtctagacccctctcacaggacttctcc
tcctcagactacagaaataactccagcagaacccccaccccaccaggacgctactcaccc
cacagtcccatcgaccgggacatacccatgtcccctcgtcgcagtagtacgagctctgac
tttgccatgcagaggtttgacagggactcagaggtgtacaagatgatccaggagaataag
gagtcccgcacggcgcctcgtcagtccaacacctttaaaatgctgcaagaggtcctggag
gctgacgagaaaggggcagccttgaagttcccagggaagctttcacccaatgtcccaata
ccaagcgcaccagtggcaggagtcaacaaatatcacacctgtgagaagtgtggcaccagc
attgttacacaggcagtgcgtatcacagacgaccacttccgccacccagagtgctacact
tgcacagattgtggccttaacctgagaatgagaggtcacttttgggttggagacgtgatg
tactgtgagaagcatgccaaacagaggtaccaaggcccaggtagttcacctcaaaccacc
gtctcccctcgccaatga
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