Scomber scombrus (Atlantic mackerel): 133979472
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Entry
133979472 CDS
T10651
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00061
Fatty acid biosynthesis
ssco00071
Fatty acid degradation
ssco01100
Metabolic pathways
ssco01212
Fatty acid metabolism
ssco03320
PPAR signaling pathway
ssco04920
Adipocytokine signaling pathway
Module
ssco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
133979472
00071 Fatty acid degradation
133979472
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133979472
03320 PPAR signaling pathway
133979472
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssco01004
]
133979472
Enzymes [BR:
ssco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
133979472
Lipid biosynthesis proteins [BR:
ssco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
133979472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
133979472
NCBI-ProteinID:
XP_062273977
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Position
4:complement(27312086..27326817)
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AA seq
770 aa
AA seq
DB search
MSDQEDSVLSNGVAVMEADTESIATQKSQILSDSTNVKSETQSTLIISKEDTTAESVKVE
ARVTPNGSAVRSQSQETDPSRDTEAPTKLPRSPGPEQTTEGVKPEELKAVPLSSANVATT
LAPADQLWCSGRDQAVRLRMEGSGPASETPITIHQMFLEAVESHGDHPALSSKKEGQWVN
LTWRQYYEQCRVAAKSFLKLGLERYHGVGILGFNSPEWFISDIACILAGGLATGIYTTNS
PEACQYVASNCDANILVVENQKQLEKILKIKDQLPLLKAIVQYKGELQQKEPFLYTWEEF
MKVGEDVPDEQLNAVIDSLRANECCTLIYTSGTTGNPKGVMLSHDNLTWTARAAGTMVDL
NCAEDTLISYLPLSHVAAQVNDMWIAMRFAGTTYFAEPDALKGSLGATLKEVRPTSFLGV
PRVWEKMQEKMRAMGAKSSPMRKRVADWAKSIGLQYNYSAMNKENQVPWGFMLANNLVFK
RVRAALGFDRCKSFFTGAAPITKDTLEYFMSLDVPLLELYGMSESTGPHTISVNNDYHIS
SCGKVMPGCKVKLENPDEDGNGEICFWGRNVFMGYLDMADKTTETLDQEGWLHSGDLGRH
DQGDFLYITGRIKELIITAGGENIPPVPIEDAVKSETAIISNAMLLGDKLKFLSMMLTLK
CVVDDNGDPTDDLSPEALDFCRQHGVTATKVSEIIANKEPAIYKAIQEGVDRVNARATSN
AQKVQKWVILERDFSVGGGELGPTMKLRRPIVVKMYQETINEVYAVKETQ
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagaagattctgttttgagcaatggcgtggcagtcatggaagctgacacg
gagagcatcgctacccaaaagtcacaaatactgtcggactccacaaacgttaagagcgag
acccaatccaccctcatcatcagcaaagaggacacaactgcagagtcagtgaaggttgag
gccagagtgactccaaatgggtccgcagttcggtcacaatcccaggagactgatccctcc
agggacaccgaggcacccaccaaacttccaagatctcctgggccagagcaaactactgaa
ggagttaaaccagaggagctcaaggcagttcccctgtcgtctgcgaatgtagcaacgact
ttggccccggctgaccagctatggtgcagcggcagagaccaggcagtcaggctgaggatg
gagggatcaggaccggcgtcggagactcccatcacgatccatcagatgtttttggaggcg
gtggagagccacggggatcatccagccttgtcttccaaaaaagaggggcagtgggtcaac
ctgacttggaggcagtactatgaacagtgccgagtagctgccaaaagtttcctcaagctt
ggcctggagcggtaccatggtgtgggtattctgggattcaactctccagagtggttcatc
tcagacattgcctgcatcttggctggaggtctggcaaccggcatttacacgaccaactca
cccgaagcttgccagtacgtggcttccaactgtgacgccaacatcctggttgtggagaac
cagaaacagctggaaaaaatcctgaagattaaagatcaactacctcttctgaaggccatt
gtccagtataaaggggagctgcagcagaaggaaccattcctgtacacatgggaagagttc
atgaaggtgggagaggatgtgcccgacgaacagctgaatgcagtgattgacagtcttcgc
gcaaacgagtgctgcaccctcatctatacctcagggaccaccggcaacccaaaaggtgtc
atgttgagccacgataatctgacatggacggcgcgtgcagccggcaccatggtggatctg
aactgcgctgaggatacgttgatcagttacctgccgctcagccacgtggcagcgcaggtc
aacgacatgtggatcgcgatgaggtttgccgggaccacctactttgcagagccagacgcc
ctcaagggctctttaggagcaacactgaaagaggtgcgtccgacttctttcctgggagtt
cctcgcgtgtgggagaagatgcaggagaaaatgagggctatgggtgccaagtcgtcccca
atgaggaagagagtggcagactgggccaagtccatcggactgcagtacaactacagtgcc
atgaacaaggagaatcaggtgccctggggcttcatgctggcaaacaatctggtcttcaag
agggtgcgtgcagcgctgggcttcgaccgctgcaagtcttttttcaccggcgccgccccc
atcaccaaagacactctggagtacttcatgagcctggacgtccctctgctggagctgtac
ggcatgagtgaaagcaccggcccgcacaccatatccgtgaacaacgactaccacatctca
agctgtggaaaggtgatgccgggctgtaaagtgaagctggagaacccggacgaggacggg
aacggagagatctgtttctggggtcgtaacgtcttcatgggctacctggacatggccgac
aaaaccacagagactctggaccaggaaggctggctgcactctggagacctgggaagacac
gaccagggagacttcctgtacatcacgggaaggattaaagagctgatcatcaccgccggt
ggagagaacatccctcccgtccccatcgaggacgcggtgaagagcgaaacggccatcatc
agcaacgccatgctgcttggagacaagctcaagttcctgtccatgatgctcaccctcaaa
tgtgttgtggacgataacggtgaccccacagacgacctgagcccagaggctttggatttc
tgccggcagcacggcgtcacagcaaccaaggtgtcggagatcatcgccaataaggagccg
gcgatctacaaagccattcaggagggggtggatcgcgtcaatgccagagcgacgtccaat
gcccagaaggtccagaagtgggtcatactggagcgagacttctctgtcggcggaggagag
ctgggacccaccatgaagctgaggaggcccattgtagtgaagatgtaccaggagacgatc
aatgaagtatatgcagtgaaggagacacagtag
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