Scomber scombrus (Atlantic mackerel): 133979547
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Entry
133979547 CDS
T10651
Symbol
arrdc1a
Name
(RefSeq) arrestin domain-containing protein 1a
KO
K26228
arrestin domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133979547 (arrdc1a)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
133979547 (arrdc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
LDB19
Spo0M
Rgp1
PGM_PMM_II
Motif
Other DBs
NCBI-GeneID:
133979547
NCBI-ProteinID:
XP_062274070
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All DBs
Position
4:4993902..5011210
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AA seq
469 aa
AA seq
DB search
MGKVQEFEIAFDKNKVVYSPGESITGTVTVKLGQQLQCKAVKVNCNGFCGITSKENDTAW
TTEEQYFNSTVSISDKGTLKQGEHKFPFKFLIPASAPTSFEGNYGKIVYRVRAFIDTPRF
AKDYNTEKPFFLLSLFNLNQVPDIWGTSSSAVTQQFTYMLVKTGTVVLKAQTDMKGYTPA
QIIQVTANIHNQSGKSTGNIMASLMQRVTYETKKPTHDMRAIAEVEGGTVKAGKEVEWKE
QIIVPPLPQSCLAGCELIKIEYFVKVSLKSPDVMLTLPLHIGNVSLDKKLQPSNKAAPPS
SSAPAEHTPTPASAPDGSTPVSAPDASASATTPTLPPRRAPKPAPRPAPRARSSSHNNTP
SAPPAEFYEGAEGGAPMSDGVPNKRQSLLVSPNAFSYAPGLFFPQNQQPGGSAAGPGGPP
FSGSTGATSLYPPLNNVSPMPASLVLPPDYDTSAYPQEAPPSYDESFNT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagttcaggagtttgagatcgcgtttgacaaaaataaagtggtgtacagtcct
ggagagtctatcacaggaaccgtgactgttaaactgggccagcagctacaatgtaaagcc
gtcaaggtgaactgcaacggtttctgcggcatcaccagcaaagagaacgacacagcttgg
acgacggaggagcagtacttcaacagcaccgtctccatctcagacaaaggaaccctgaaa
caaggagaacacaagtttcccttcaagttcctcattccagcctctgctccaacatccttc
gaaggcaactacggtaagatcgtgtacagagtgagagctttcatcgacacgccgcgattc
gccaaagactacaacacagagaaacccttcttcctcctcagcctcttcaacctgaaccaa
gtgccagacatatggggtaccagttcctctgcagtgacccagcagttcacctacatgctg
gtgaagacgggcactgtggtcctgaaggcccagaccgacatgaagggctacacaccagct
cagatcatccaggtgacggccaacatccacaaccaatcgggcaagagcacgggcaatata
atggccagtctgatgcagagagtaacctacgagaccaaaaagcccacccatgatatgagg
gcgatagcagaggtggagggcggtacggtgaaggccggcaaggaggtggagtggaaggag
cagatcatcgttcctcctcttcctcagtcctgcctcgctggctgtgaacttataaagatt
gaatattttgtcaaagtcagtctgaagtctccagacgtcatgttgacgttaccgctccac
attggcaacgtctccctggacaaaaaacttcaaccctccaacaaagcagctcctccttct
tcctccgcccctgccgaacacacaccaacccccgcctcagcccccgacggctccaccccc
gtctcagcccccgacgcctccgcttctgccaccacccccaccttaccccctcggcgcgcc
ccgaaacccgctccccgcccggccccccgcgccagatcgtcctcccataataacacccca
agcgctcctccggccgagttctacgagggagcggaggggggcgcgcccatgagcgacggc
gtccccaacaagcgccagtctctgctcgtgtcgcccaacgccttcagctacgcccccggc
ctcttcttcccccagaaccagcagcccggcggttccgctgcaggacccggcggacctccg
ttcagcggctccacaggggccacatcactttatcctcctctgaacaatgtcagcccgatg
ccggcctcactcgtcctgcctccagactacgacacctctgcatatccacaagaggctcct
ccttcctacgacgagagcttcaacacatga
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