Scomber scombrus (Atlantic mackerel): 133979566
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Entry
133979566 CDS
T10651
Symbol
slc4a5a
Name
(RefSeq) electrogenic sodium bicarbonate cotransporter 4
KO
K13857
solute carrier family 4 (sodium bicarbonate cotransporter), member 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133979566 (slc4a5a)
04147 Exosome [BR:
ssco04147
]
133979566 (slc4a5a)
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
133979566 (slc4a5a)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133979566 (slc4a5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
Xan_ur_permease
DUF4834
Motif
Other DBs
NCBI-GeneID:
133979566
NCBI-ProteinID:
XP_062274093
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Position
4:2335053..2364826
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AA seq
1135 aa
AA seq
DB search
MDHGDRGMGVSHLRYEDEEDHQSIYIGVPVPRGYRRKRRRRRSSREASDLERDSRRYSQR
RHHEHDQYRDIDIEEGLTDTNDQSLPDINRTVSPAAERLRYILNEEDDMPTPTLFTEMDT
LQREGDELEWKESARWVKFEEKVEEGGERWSKPHVSTLSLHSLFELRTCLQTGTVLLDLE
GYSLPQIVDDIIDRQIEEGMISPDLRDQITFVLLRKHRHQTKKPIHRSLADIGKSSSSTN
RNVGPRGGPGPAPGPGQMANFNRSTEDIRMKQQPSNYGRLRHAQSRSMNDIADTPSTDQL
KNKFMKKIPRDAEASNVLVGEVDFLTKPFVAFVRLSQATTLGGLTEVPVPTRFLFILLGP
QGKAKSYNEIGRAIATLMVDDLFSDVAYKARDREDLIAGIDEFLDEVIVLPPGEWDPKIR
IEPPKKVPSADKRKSVFSLNELGQMNGTAGGGGGLAEDEEMPEQHELGEELAFTGRFCGG
LFLDIKRKLPWVPSDIYEGFHIQSISAVLFIYLGCITNAITFGGLLGDATDNYQGVMESF
LGTALAGSVFCLFSGQPLIILSSTGPILIFEKLLYEFSKNNGIDYMELRLWIGMHSCLQC
FILVATDASYIIKYMTRFTEEGFSSLISFIFISDAIKKMVGSFKYYPINTDFKPDYVTAY
KCECLAPDPIPIPDNSSSVSGLNVTALDWSQLSKKECLKYGGSLVGNTCKYVPDLALMSF
ILFFGTYSMTVSLKKFKFSRYFPTKLRKLISDFSIFMSIMTFVGLDMLIGLKTPKLIVPT
EFKPTRPGRGWLVMPFSKNPWWVYVASFVPALLVTILIFMDQQISAVIVNRKENKLKKGC
GYHLDLFWVGVLMAVCSFLGLPWYVAATVISIAHIDSLKMESESSAPGEQPQFLGVREQR
MTGILVFVLTGVSIFLAPVLKFIPMPVLYGVFLYMGVASLSGIQFWDRIKLYMMPSKHQP
DFSFLRHVPLRKVHLFTLIQIICLAVLWVLKSTFLAIIFPVMILGLLLVRKMLDMVFSQH
DLAWLDDLLPEKEKKKKKGEDEKKGKDKEKKKSKPDNSDDEEKFHSYTNHSPSSESDLDR
SITLHLKISCPSSPAMPMGRGMACPVPQVKIEMESDYDSDIDPHRPRDMSSETTL
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaccatggagacagagggatgggcgtctctcaccttcgctatgaggacgaggaggac
catcagtccatctacatcggtgtcccggtgcctcgaggatatcgacgcaaacgcaggcga
aggcgttctagtcgcgaggcctccgatttggaaagggacagcaggcgctacagccagcgc
agacaccacgagcacgaccagtacagagacatagacatcgaggaaggactcaccgatacg
aacgaccagagtctaccagacatcaaccgtacagtgtccccggcggcagagcggctacgt
tacatcctaaacgaagaggatgacatgcccacgccgacgctcttcactgagatggacact
ctacaacgagaaggggatgagctggagtggaaggagtctgccaggtgggtgaagttcgag
gagaaggtagaggaaggaggagagaggtggagtaaaccacacgtgtccacgctgtccctg
cacagtcttttcgagctcaggacgtgtcttcagacggggacggttctgttggacctggaa
ggctactcgctgcctcagatagttgacgacatcattgacagacagatcgaggaaggcatg
atctctcccgacctcagggaccagatcactttcgtcctgctgaggaaacatcgacaccag
accaagaagcctatccaccgctcgctagccgacatcggcaagtccagctcctcaaccaat
cggaacgtggggccccgcggcggtccagggccagcgccagggccggggcagatggccaac
tttaaccgatccacagaagacatccgaatgaaacagcagccaagtaactatggccgcctg
cgtcacgcccagagtaggagtatgaatgatattgcagatactcccagcacagatcagttg
aaaaataaattcatgaagaagatccccagagatgctgaggcatccaacgtgttggtgggt
gaagtggatttcctcaccaaaccctttgtagcctttgtccgcctgtcccaagctacaaca
ctaggaggtctcactgaggtccctgtacccaccagattcctgtttattctcttgggcccc
caaggaaaggccaaatcgtataacgagatcggccgagccatagcaacgctaatggtggat
gatctcttcagtgatgtagcatacaaggccagagatcgcgaggatctcattgcaggcata
gatgagtttttggatgaggtgatcgtgcttccacctggggaatgggatcccaaaatccgc
attgagccacccaagaaagtcccctccgctgacaaaaggaagtcagtgttttctttaaat
gaactggggcagatgaacggtacagccggcggaggaggaggactggctgaggacgaagag
atgccagagcaacatgagcttggagaggagctggcattcactggacgcttctgtggcggt
ctgttcctggacataaagcggaaattgccatgggtgcccagtgatatctacgagggtttc
cacattcagtccatttccgccgtgctcttcatctacttggggtgcatcaccaatgccatc
acctttggtggcctgctgggagacgccactgacaactaccagggtgtaatggagagtttc
ttgggtacagctctggctggctctgtgttctgtctcttcagcggccagccactcatcatc
ctcagctccaccggacccatcctcatctttgaaaagctcctgtatgaattcagcaagaac
aacggtatagactacatggagctgcgtctgtggatcggcatgcactcctgcctgcagtgt
ttcatcctggtggctaccgacgccagttacatcatcaaatacatgacgcgtttcaccgag
gagggcttctccagcctcatctccttcatctttatctccgacgccatcaagaagatggtg
ggctctttcaaatactacccgatcaacaccgacttcaagcccgactacgtcaccgcctac
aagtgcgagtgcctggccccagacccgattccaataccagataacagctctagtgtctct
gggttgaatgtgacagctctggactggagccagctgagtaagaaggagtgtctgaagtac
ggaggatctctggtggggaacacctgcaagtacgtccccgatctggccctcatgtccttc
atcctcttcttcggcacctactccatgaccgtgtccctcaagaagttcaagttcagccgc
tacttccccaccaagttaaggaaactcatcagtgacttctccatcttcatgtccatcatg
acgttcgtggggcttgacatgttgataggtctaaaaacccccaagctgatcgtcccaaca
gaatttaagccaactcggccgggtcgcggctggctggtgatgccgtttagtaagaacccg
tggtgggtttatgtggccagctttgtccccgccctcctcgtcaccatcctcatcttcatg
gaccagcagatcagcgccgtcatcgtcaaccgcaaggagaacaaacttaaaaaaggttgc
ggctaccatctggatctgttctgggtgggggtcctgatggccgtctgctccttcttaggc
cttccctggtacgtcgccgccaccgtcatctccatcgcccacatcgactctctgaagatg
gagagcgagtccagcgctcccggagagcagcctcagttcctcggggtcagagaacaaaga
atgactggcattttggtgtttgttctcactggagtctccatcttcctcgctccagtactt
aagttcatccccatgcctgtgctgtatggtgtcttcctctacatgggtgtagcttcgctc
agtggaatccagttctgggacaggatcaagttgtacatgatgccgtccaagcaccagccg
gacttctccttcctgcgccacgttcctctgaggaaggtccacctgttcacgctcatccag
attatatgtctggctgtgctctgggtcctcaaatccaccttcttggctatcatcttccct
gttatgatccttggtctgctgctggtccggaagatgttggacatggtcttctcccagcat
gacctggcctggctcgacgacttgctgcctgagaaagagaagaagaagaagaagggtgaa
gacgaaaagaaggggaaggataaggagaagaagaagtctaaaccagataacagcgatgat
gaggagaagttccactcctatacaaaccattctcccagctcagagtcggacttggatcgc
agcatcaccctccacctgaagatctcctgcccgtcgtctccggccatgcccatgggccga
gggatggcctgccccgtgccccaggtcaagatcgagatggagtcggactacgactcggac
atcgacccccaccggccccgcgacatgagcagtgagaccacgttataa
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