Scomber scombrus (Atlantic mackerel): 133979576
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Entry
133979576 CDS
T10651
Symbol
dhx37
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133979576 (dhx37)
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133979576 (dhx37)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
90S particles
Helicases
133979576 (dhx37)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
WHD_HA2
AAA_19
DUF4746
nSTAND3
Flavi_DEAD
ResIII
ATPase
TniB
Microtub_bd
AAA_16
FAA_hydrolase_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
133979576
NCBI-ProteinID:
XP_062274104
LinkDB
All DBs
Position
4:22800020..22809938
Genome browser
AA seq
1154 aa
AA seq
DB search
MGKMRKKHNWKGRQQNEPQQAADGEKAEIVLELKDGDRLKGVDASNALVLPANKAKKKKA
LAAPISSKRPLTKKQRKELQKVLERKEKKAQRADILSKLAEVQLPESELKLLYTTSKLGT
GEKLYQTKLSPDELKDGESAPKISSLSGANRKRKWKEEEDEDEEEQKAEESSDLDTSSEE
DEDGEGKEIMETSEAKETATDCQETEQKLKEEQQTTEKEETSEKTVSDQEKVQIKKLSQP
AVFIPVDRLAEIQESRLKLPVLAEEQVIMEAVRENPCIIICGETGSGKTTQVPQFLYEAG
YASGSGIIGITEPRRVAAVSMSHRVAKEVNLSTRVVSYQIRYEGNVTDETKIKFMTDGVL
LKEIQKDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLLVMSATLRV
EDFTDNRKLFKIPPPVIKVDARQFPVTIHFNKRTPLEDYTAEAFHKTCKIHRMLPPGGIL
VFLTGQAEVHGLCRKLRKAFPFRKGNTTTGEDEEADSSEAMRKFKKAKQKKPVSLPRIDL
DNYSALPVDEGDEDRDAGIGEDEDEGSDLDIGDDTADKEEKADPSIPLYVLPLYSLLAPE
QQAKVFRPPPSGTRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKVSWT
SQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEAEITRRPVEDLVLQMKDLNIDKV
VNFPFPTSPSAEALIAAEQLLVSLGALKEPPRTGSIKQIEQARLSCPITPLGSAMASFPV
APRYAKMLALGKQQDCLPFVIAVVAAMTVREIFEDLNRPAGSEDENSELTQRRARLTQMR
RLWAGQGASLLLGDLMVMLGAVGACEFAGCTPKFCEENGLRYKSMVEIRRLRGQLTNAVN
AVCPEVGVFVNPRMAPPTEHQVVCLRQIVLAGLGDHLARRVQAEDLLDPKWKNGYKTPLM
DEPVFIHPTSALFKKLPEFIVYQEIMETSKMYMRGVSAVEAEWVPLLLPQYCHFGTPLES
PSPWVCSSTGTIRCHRRSTFFRVGWQLPAVEKEYPDGIERYKLFARFLLEGQVCPKLKKH
CGHLLSNPSIMLKTWAKLQPRTEAVLGALVSKRIDCREALLSTWKTEEKFLLSAYCQWLP
EALHQEVAKSWPPL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaatgaggaagaagcacaactggaaggggaggcagcagaatgaacctcagcag
gctgcagatggagaaaaggcagaaattgtgctggaactaaaagatggagacagactgaag
ggtgtagacgcgagcaacgctttggtccttccagccaacaaagccaagaagaagaaagcc
ttagcggcgcctatttcctccaaaaggcctctgacaaagaaacaaaggaaagagctgcag
aaggtgctcgagcgcaaggagaagaaagctcagagagccgacatcctgtccaagctggcc
gaggttcagcttccagagtccgagctgaagctgctgtacaccacgtccaaactgggcaca
ggagagaagctttaccagactaaactgtcaccagacgaactaaaagatggagaatctgca
ccgaagattagcagcctgagtggagcgaacaggaagaggaaatggaaagaagaggaggat
gaagacgaggaagaacagaaggcagaagaaagtagtgatctggacacgtcgtctgaagag
gatgaggatggcgaagggaaggagatcatggagacgagtgaggctaaggaaaccgccact
gactgtcaggagaccgaacagaagctgaaagaagaacaacagacgacagagaaagaagag
acgagtgagaagacggtttcagatcaggagaaagtgcaaataaagaagctgtcgcagccg
gccgtcttcattccagtcgacagattagcagaaatacaggagtcccgtttgaagctgccg
gtgctggcggaggagcaggtcatcatggaggccgtcagagagaatccctgcatcatcatt
tgtggagagacaggaagtggaaagaccacacaggtgcctcagttcctgtacgaggcaggc
tacgccagcggctcgggcattatcggcatcacagaaccgagaagagtagcagcggtcagc
atgtcgcaccgagtggccaaagaggtgaacctgtcgacacgagtcgtgtcgtaccagatc
cgatacgaggggaacgtgaccgacgagaccaagatcaagttcatgacagacggtgttctg
ctgaaggagattcaaaaggatttcctgctgcagaagtacagcgtgatcatcatagacgaa
gcacacgaacgcagtgtgtacacagacatcctcattggactgctgtctcgtatcgttcct
ctcagaaataagaaaggtttgcccatgaagttgttggtcatgtcagctactctgcgtgtg
gaggacttcacggacaaccggaaactgtttaagatccctccgcccgtcatcaaggtggac
gctcgccagttcccggtcactattcatttcaacaaacgcaccccgttagaggattatacc
gcagaggccttccacaagacctgcaagatccaccgcatgctgcctccaggtgggatcctg
gtcttcctcactggtcaggcggaggttcacggtctgtgcagaaaactgagaaaagctttc
cccttcaggaagggaaacactacgaccggtgaggatgaggaggcagacagctcagaggca
atgaggaagtttaagaaggccaaacagaagaagcctgtttcgctgcctcgtatcgacctg
gataactactctgctctgccggtggatgaaggggacgaagacagagacgcaggaatcgga
gaggacgaggatgaaggctctgacctggacatcggagacgatactgccgacaaagaggag
aaggcggacccttccattcctctctatgtcctccctctgtactctctgctggccccagag
cagcaggcgaaggtgttcaggcctcctccatctggcactcgtctgtgtgtcgtagccacc
aacgtggccgagacgtctttgaccatccccggcatcaagtacgtggtggactgtggtcgg
gttaagaaacgtttctacgatcgagtgaccggagtgtcgtccttcaaggtgtcgtggacc
tcgcaggcttcagccaatcagagggcaggcagagcgggacgaacagagccgggacattgc
tacaggttgtactcgtctgctgtgtttggagacttcagtttgttctcagaagcagagatc
actcgcaggcctgtggaggatctggttttgcagatgaaagacctcaacatagacaaggtg
gtcaatttccccttccccacgtctccctctgctgaggctcttattgcagcagagcagtta
ttagtctcactgggagctctgaaggagccgcctcgcaccggcagcataaaacagatagag
caagcaagactgagctgtcccatcacccccctgggcagcgcgatggcttcgttccccgtc
gcgccacgttatgctaaaatgctagcactcgggaagcagcaggattgcctgccctttgtt
attgccgtggtagcagccatgacagtcagggagatctttgaagaccttaacagacctgca
ggtagtgaagatgagaactccgagctcactcagcgtcgggctcggctgactcaaatgagg
aggctttgggctgggcaaggagcctcactcctgctgggggacctcatggtcatgctgggt
gctgttggtgcttgtgaatttgctggctgcacgcctaagttttgcgaggagaacggcctg
aggtataaatccatggtggagatccggcggctcagaggacaacttacaaatgcagtcaat
gcagtgtgtccagaggtgggagtatttgtaaatcccagaatggctccacctacagagcat
caggtggtttgcttgcggcagatcgttctggccggactgggagatcatcttgctaggcgc
gtacaggcagaagatcttcttgacccaaaatggaagaatggatacaagacaccacttatg
gacgaaccggttttcatccacccaacttctgcgctgttcaaaaagctgcccgagtttatc
gtctatcaggagatcatggagaccagcaagatgtacatgagaggtgtgtcagcagtggaa
gcagagtgggttcccctgcttctgcctcagtactgtcatttcggcacacctctggagtct
ccatcaccgtgggtttgttcctccacaggcaccatcagatgtcaccgtcgaagcaccttc
ttccgcgtgggctggcagctgcctgcagtggagaaggaatatccagatggcatcgagcgc
tacaaactgttcgccaggtttctgctcgagggacaggtttgtcctaaattaaagaaacac
tgtggccaccttctctcaaacccctccatcatgctgaaaacgtgggcaaagctgcagccc
aggacggaggctgtactgggagcgctggtgtcaaagagaattgactgcagagaagctctg
ctctccacctggaagactgaagagaaattcctgttgtctgcatactgccagtggcttcct
gaagctctgcatcaagaagtagccaaaagttggcctccgctatga
DBGET
integrated database retrieval system
