Scomber scombrus (Atlantic mackerel): 133979596
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Entry
133979596 CDS
T10651
Name
(RefSeq) vesicle-associated membrane protein 8-like
KO
K08512
vesicle-associated membrane protein 8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04130
SNARE interactions in vesicular transport
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133979596
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133979596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133979596
Membrane trafficking [BR:
ssco04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
133979596
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Baculo_F
Prominin
LRRC37AB_C
Fzo_mitofusin
RNF152_C
DUF1129
ODV-E18
RIFIN
Baculo_11_kDa
Myelin_PLP
Ferlin_C
CD34_antigen
DUF3619
Orf78
DUF5693
Motif
Other DBs
NCBI-GeneID:
133979596
NCBI-ProteinID:
XP_062274128
LinkDB
All DBs
Position
4:complement(2175409..2182350)
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AA seq
122 aa
AA seq
DB search
MDVDPERGGVAEVPEPKDKVQTLKDQVDGVKNIMTQNVDRILARGERLDDLMGKSEDLQA
GAQHFKQTSQKVARSYWWKNVKLIVLIVVVVLIIVLIIVLLATGVIPTSSPLPPIVTPTS
KP
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgatccggagcgaggaggagtggcggaagtgccggagccaaaggacaaggtg
cagaccttgaaggatcaggtcgatggagtcaaaaacatcatgacgcaaaacgtggaccga
atcctggcccgaggggagaggctggatgacctcatgggcaaatcagaggacctgcaagca
ggggctcagcactttaagcagacgtctcagaaggtggctcgctcctactggtggaagaac
gtcaagctgatcgtgttgatcgtcgtggtcgtcctcatcatcgtcctcatcatcgtcctg
ctggctaccggagtcatccccaccagttcccccttgcctcctatagtcactcccacctcc
aagccataa
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