Scomber scombrus (Atlantic mackerel): 133979965
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Entry
133979965 CDS
T10651
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133979965
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133979965
NCBI-ProteinID:
XP_062274501
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Position
5:complement(33451847..33523499)
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AA seq
1208 aa
AA seq
DB search
MKSDWSMGRPIMFKDGQPADGRAQQQSSEVPSDQSAQQHQTQLDSIFMLLEENIVTFVKN
ELKRVQRGLSTGYPECLESQSEDEEVLDGEEEEQRRSSRDAFLKITLHFLRRMKQEELAE
RLQSRTGAAKCRYKLKSNLEKKFQCLFEGIAKAGNPTLLKQIYTPLYITEGGTAEVNDEH
EIRQIETASRKPDRPETTIRQEDFFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWA
EDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGL
DECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVG
MVTEVRGFTDPQKEEYFRKRFRDEEQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDV
LKSRKRRELPKTLTEMYIHFLVVQCKLKNIKYDGGAETDPHWSTESRKMIESLGKLAFEQ
LQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEETGLYQDTVFCFVHLSVQEFLAAL
HVHLTFINSGVNLLEEEQTTSWWSEAFGGKSARFYQSAVDEALKSPNGHLDLFLRFLLGL
SLQSNQTLLRGLLTQTGSSSKTNQKTVEYIKKKISENVSAERSINLFHCLNELNDRSLVE
DIQQYLRSGSLSTDKLSPAQWSAVVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKAS
NKALLSDCNLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCGLET
FRLSGCNLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCGLEIFR
LSDCNLSERSCAALSSVLSSQSSGLRDLDLSHNELQDSGVKQLSAGLESPHCGLEIFRLS
DCNLSERSCAALSSVLSSQSSGLRDLDLSHNELQDSGVKQLSAGLESPHCGLETLSLSAC
LITEEGCASLASALSSNPSHLRELDLSYNHPGDSGEKLLSAGLKDPHWRLDTLRMDHGGP
QRMNCEYACELELDPNTMNTNLKLSDNNRKVTYVKEDQSYPDHPDRFDYWKQLLCRNVLT
GRCYWEVEWRGRVYISVSYRRISRKGNSDDCLFGWNDQSWCLDCSDDDGYSVWHNKRRTS
ISSSSSSSSSSSSSVSNRVAVYVDCPAGTLSFYRVSSDSLIHLHTFNTTFTDPLYAGFIV
CSGSSVSL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgactggtctatgggtcgtcctattatgtttaaagatggacaacctgctgat
ggaagagctcagcagcagagctcagaggttcccagtgatcagtctgcacagcagcatcaa
acacagctggactccatatttatgctgctggaggagaacatcgtcacttttgtgaagaac
gagctgaagagagtccagaggggtctgagtacaggttacccagaatgcttagagagtcag
agtgaggatgaggaggtgttggacggtgaggaggaagagcagaggaggagcagcagagac
gcatttctgaagattacactgcacttccttaggagaatgaagcaggaggagctggctgag
cgtctgcagagcagaactggtgctgcaaagtgtcgatataaactcaagtctaacctggag
aagaagttccagtgtctgtttgaggggatcgctaaagcaggaaacccaacccttctgaaa
cagatctacacaccgctctacatcacagagggagggactgcagaggtcaatgatgaacat
gagatcagacagattgaaacagcatccaggaaaccagacagaccagaaacaacaatcaga
caagaagacttctttaaagcctcacctggaagagatgaaccaatcagaacagtgatgaca
aagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggct
gaagacaaagccaaccaggacatacacttcacatttccattcactttcagagagctgaat
gtgctgaaagagaaaaagtacagcttggtggaacttgttcatcacttctttactgaaacc
aaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctg
gatgagtgtcgacttcctctggacttccacaacactgagatcctgactgatgttacagag
tccacctcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccctctgct
cgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgtcggc
atggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagaga
ttcagagatgaggagcaggccagcaccatcatctcccacatcaagacatcacgaagcctc
cacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtg
ttgaaaagcagaaagagaagagagctgcccaagaccctgactgagatgtacatccacttc
ctggtggttcagtgcaaactgaagaacatcaagtatgatggaggagctgagacagatcca
cactggagtacagagagcaggaagatgattgagtctctgggaaaactggcttttgagcag
ctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatc
agagcagcctcagtgtactcaggagtgttcacacaggtctttaaagaggagacaggtctg
taccaggacacagtgttctgcttcgtccatctgagtgttcaggagtttctggctgctctt
catgtccatctgacattcatcaactctggagtcaatctgctggaagaagaacaaacaaca
tcctggtggtctgaagcgtttggaggcaaatcagcacgtttctaccagagtgctgtggac
gaggccttaaagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctt
tcactgcagagcaatcagactctcttacgaggtctgctgacacagacaggaagtagctca
aagaccaatcagaaaacagtcgagtacatcaagaagaagatcagtgagaatgtgtctgca
gagagaagcatcaatcttttccactgtctgaatgaactgaatgatcgttctctagtggag
gacatccaacagtacctgagatcaggaagtctctccacagataaactgtctcctgctcag
tggtcagctgtggtcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctg
aagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctcc
aacaaagctctgttgagtgactgtaacctctcagagagaagctgtgcagctctgtcctca
gttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaacctgcag
gattcaggagtgaagcagctttctgctggactggagagtccacactgtggactggaaacc
ttcaggctgagtggctgtaacctctcagagagaagctgtgcagctctgtcctcagttctc
agctcccagtcctctagtctgagagatctggacctgagtaacaacaacctgcaggattca
ggagtgaagcagctttctgctggactggagagtccacactgtggactggaaatcttcagg
ctgagtgactgtaacctctcagagagaagctgtgcagctctgtcctcagttctcagctcc
cagtcctctggtctgagagatctggacctgagtcacaacgagctgcaggattcaggagtg
aagcagctttctgctggactggagagtccacactgtggactggaaatcttcaggctgagt
gactgtaacctctcagagagaagctgtgcagctctgtcctcagttctcagctcccagtcc
tctggtctgagagatctggacctgagtcacaacgagctgcaggattcaggagtgaagcag
ctttctgctggactggagagtccacactgtggactggaaactctcagtctgtcagcatgt
ctgatcacagaggaaggctgtgcttctctggcctcagctctgagctccaacccctcccat
ctgagagagctggacctgagctacaatcatccaggagactcaggagagaagcttctgtct
gctggactgaaggatccacactggagactggacactctcaggatggaccatggtggaccg
cagagaatgaattgtgagtatgcctgtgaactggaactggatccaaacacaatgaacaca
aacctcaaactgtctgataacaacaggaaggtgacatatgtgaaggaggatcagtcatat
cctgatcatccagacagatttgattactggaaacagctgctgtgtagaaatgttctgact
ggtcgctgttactgggaggtcgagtggagaggaagagtttatatatcagtgagttacaga
agaatcagcaggaaaggaaacagtgatgactgtttgtttggatggaatgatcagtcctgg
tgtctggactgctctgatgatgatggttactctgtctggcacaataagagaagaacatcc
atatcctcttcctcctcctcctcctcctcctcctcctcctctgtatctaacagagtagca
gtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctctgactcactg
atccacctccacaccttcaacaccacattcactgatcctctgtatgctgggtttatagtc
tgctctggttcctcagtgtctctgtag
DBGET
integrated database retrieval system
