Scomber scombrus (Atlantic mackerel): 133979966
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Entry
133979966 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133979966
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GFIT
Other DBs
NCBI-GeneID:
133979966
NCBI-ProteinID:
XP_062274502
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Position
5:33136345..33155844
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AA seq
1088 aa
AA seq
DB search
MDQCEDREEGVPPSKSSLCGEHDSQTKAQRMQQQRADSPEPSCVSMKSDRSMYRGIKFKG
GQPADGRVQQQSSEVPSDQSAQQHQTQLDSIFMLLEENIVTFVKNELKRVQRGLSPDDPD
CLESQSEDEEVLDGEEETQRRSSREAFLKITLHFLRSMKQEELAELLQSRARAAKCRRKL
KSNLEKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEIRQIETASRKPDRP
ETTIRQEDIFKASPGRDEPVRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFT
FRELNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNNEIL
TDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVSMVTEIRGFTDPQKEE
YFRKRSREEEQASSIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSIEGGELPKTLTE
MYIHFLVLQSKLKNVKYDGGAETDPHWSPESKKMTESLGKLAFEQLQKGNLIFYESDLTE
CGIDIRAASVYSGVFTQVFKEERGLYQDKVFCFVHLSLQEFLAALHVHLTFIKSGVNLLE
EEQTTSWWSKVFKDKPEPIRFYQSAVDKALKSPNGHLDLFLRFLLGLSLQTNQILLRGLL
RQTGSSSQTNQKTVKYIKKKISENLSAERSINLFHCLNELNDRSLEEEIQQYLRSGSLST
DKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVAKASNKALLSGCNLSER
SCAALSSVLSSQSSSLRDLDLSHNELQDSGVKQLSAGLESPNCGLETLSLSGCLITEEGC
ASLASALSSNPSHLRELDLSYNHPGDSGEKLLSAGLKDPHWRLDTLRMDHGGLQRLKPGV
MKYACELELDPNTMSRNLKLSDNNRKVTRVEEDQSYPDHPDRFDYWDQLLCRNDLTGRCY
WEVEWRGRVNISVSYRGISRKGDSDDCWFGWNDHSWCLSCSDDGYSVCHNNSRTPISSSS
SSSSSSSSSSSSSSSVSNRVAVYVDCPAGTLSFYRLSSDSLIHLHTFNTTFTQPLYAGFT
VWSGSVAL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagaggatgcagcagcagagagcagactctcctgaa
cccagctgtgtgtccatgaagagtgaccggtctatgtatcgtggtattaaatttaaaggt
ggacaacctgctgatggaagagttcagcagcagagctcagaggttcccagtgatcagtct
gcacagcagcatcaaacacagctggactccatatttatgctgctggaggagaacatcgtc
acttttgtgaagaacgagctgaagagagtccagaggggtctgagtccagatgacccagat
tgcttagagagtcagagtgaggatgaggaggtgttggacggtgaggaggaaacgcagagg
aggagcagcagagaggcatttctgaagatcacactgcacttcctgaggagtatgaagcag
gaggagctggctgagcttctgcagagcagagctcgtgctgcaaagtgtcgacgtaaactc
aagtctaacctggagaagaagttccagtgtctgtttgaggggatcgctaaagcaggaaac
ccaacccttctgaatcagatctacacaccgctctacatcacagaaggaggcactgcagaa
gtcaatgatgaacatgagatcagacagattgaaacagcatccaggaaaccagacagacca
gaaacaacaatcagacaagaagacatctttaaagcctcacctggaagagatgaaccagtc
agaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttc
actctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattcact
ttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcac
ttctttactgaaaccaaggaagcaggaatctgcaggtttgaagagttccaggttgtgttc
atctttgacggtctggatgagtgtcgacttcctctggacttccacaacaatgagatcctg
actgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaa
ctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
cctgagtgtgtcagcatggtgacagagatcagagggttcactgacccacagaaggaggag
tacttcaggaagagatccagagaagaggagcaggccagctccatcatctcacacatcaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctaca
gttctggaggatgtgttgaaaagcatagagggaggagagctgcccaagaccctgactgag
atgtacatccacttcctggtgcttcagtccaaactgaagaacgtcaagtatgatggagga
gctgagacagatccacactggagtccagagagcaagaagatgactgagtctctgggaaaa
ctggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtctttaaa
gaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctgagccttcaggag
tttctggctgctcttcatgtccatctgacattcatcaagtctggtgtcaatctgctggaa
gaagaacaaacaacatcctggtggtctaaagtctttaaagacaaacctgaaccaatacgt
ttctaccaaagtgctgtggacaaggccttaaagagtccaaatggacacctggacttgttc
ctccgcttcctcctgggtctttcactgcagaccaatcagattctcctacgaggtctgctg
agacagacaggaagtagctcacagaccaatcagaaaacagtcaagtacatcaagaagaag
atcagtgagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactg
aatgatcgttctttagaggaggagatccaacagtacctgagatcaggaagtctctccaca
gataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaa
gatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctg
ctgccagtggccaaagcctccaacaaagctctgttgagtggctgtaacctctcagagaga
agctgtgcagctctgtcctcagttctcagctcccagtcctctagtctgagagatctggac
ctgagtcacaacgagctgcaggattcaggagtgaagcagctttctgctggactggagagt
ccaaactgtggactggaaactctcagtctgtcaggatgtctgatcacagaggaaggctgt
gcttctctggcctcagctctgagctccaacccctcccatctgagagagctggacctcagc
tacaatcatccaggagactcaggagagaagcttctgtctgctggactgaaggatccacac
tggagactggacactctcaggatggaccatggtggactgcagagactgaaacctggtgtg
atgaagtatgcctgtgaactggaactggatccaaacacaatgagcagaaacctcaaactg
tctgataacaacaggaaggtgacacgtgtggaggaggatcagtcatatcctgatcatcca
gacagatttgactactgggatcagctgctgtgtagaaatgatctgactggtcgctgttac
tgggaggtcgagtggagaggaagagttaatatatcagtgagttacagaggaatcagcagg
aaaggagacagtgatgactgttggtttggatggaatgatcattcctggtgtctgagctgc
tctgatgatggttactctgtctgtcacaataacagcagaacacccatctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctcctcctctgtctctaacagagta
gcagtgtatgtggactgtcctgctggcactctgtccttctacagattatcctctgactca
ctgatccacctccacaccttcaacaccacattcactcaacctctgtatgctgggtttacg
gtctggtctggttcagtggctctgtag
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integrated database retrieval system
