Scomber scombrus (Atlantic mackerel): 133980055
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Entry
133980055 CDS
T10651
Name
(RefSeq) claudin-1-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecules
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133980055
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133980055
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133980055
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133980055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133980055
04147 Exosome [BR:
ssco04147
]
133980055
04515 Cell adhesion molecules [BR:
ssco04515
]
133980055
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133980055
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133980055
Exosomal proteins of colorectal cancer cells
133980055
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133980055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF1461
DUF6223
SLATT_3
Motif
Other DBs
NCBI-GeneID:
133980055
NCBI-ProteinID:
XP_062274606
LinkDB
All DBs
Position
5:32542247..32547429
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AA seq
223 aa
AA seq
DB search
MAVGLQVLGLVLGVVSWCLTSSCTSSQVWKVRSQAESVATSQWQMEGLWMSCAATSMGSI
QCSKFKTVLGLPAHLQVCRALMILSLLVGLASIIVSVLGLKCTKIGRTSEHVKDQIALSG
GVLFILSGLFTLIAVSWYAARVIHDFNNPYGAVRFELGTGLYLGWGASCLALLGGSMLCC
SCKKKYPTPPARQFSYNYSNSSRGPSIYRAAPASDNVSTKAYV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgggtctgcaggtcctgggtctggttctgggcgtcgtgtcctggtgtctgaca
tccagctgtacgtcgtctcaggtgtggaaggtgaggagtcaggccgagtccgtcgccacc
agtcagtggcagatggaaggtctgtggatgagctgcgctgccacatcgatgggatccatc
cagtgcagcaagttcaagacggtgctgggactgccggctcacctgcaggtgtgccgggcc
ttgatgatcttgtccctgctggtcggtttggcctccatcatcgtctccgtgctcggactc
aagtgcaccaagatcggcagaacctctgagcacgtcaaagaccagatcgccctgagcgga
ggagtcctgttcatcctgtccggtttgttcactctgatcgctgtgtcctggtacgctgca
cgagtcatccacgacttcaacaacccgtacggagcagtgcggttcgagctgggcactggg
ctgtatctgggctggggagcttcctgtctggctctcctgggaggctccatgctctgttgc
tcctgtaagaagaagtatcccactcctcctgcacggcagttttcatacaactactccaac
agcagtcgagggccgagcatctacagagcagctccagcttcagacaacgttagcaccaaa
gcttacgtctaa
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integrated database retrieval system
