Scomber scombrus (Atlantic mackerel): 133980068
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Entry
133980068 CDS
T10651
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03020
RNA polymerase
ssco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133980068 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
133980068 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssco03021
]
133980068 (polr2d)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133980068 (polr2d)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
133980068 (polr2d)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
133980068 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
133980068
NCBI-ProteinID:
XP_062274622
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All DBs
Position
5:complement(33742612..33746874)
Genome browser
AA seq
144 aa
AA seq
DB search
MATGGGAATAHVGDVEEDASQLQFPKEFENSETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELSSLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggaggcggcgcggctactgctcatgtcggtgatgttgaagaagatgcttct
cagctgcagttccccaaagagttcgagaactcggagacgctgctgaactcggaggtccac
atgttgctggaacatcggaagcagcagaacgagagcgcggaggacgagcaggagctgtcc
gaagtcttcatgaagacgctcaactacacggctcgattcagccgcttcaagaacagagag
accatcaccgccgtgcgcagtctcctcctgcagaagaagctccataagttcgagctgtcc
agtttggccaatctgtgtccagaagcagctgaagaggccaaagctttgatccccagtctg
gagggacgcttcgaggacgaggagctgcagcagatcctagacgacatccagaccaagaga
agcttccagtactga
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