Scomber scombrus (Atlantic mackerel): 133980119
Help
Entry
133980119 CDS
T10651
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecules
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133980119
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133980119
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133980119
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133980119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133980119
04147 Exosome [BR:
ssco04147
]
133980119
04515 Cell adhesion molecules [BR:
ssco04515
]
133980119
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133980119
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133980119
Exosomal proteins of colorectal cancer cells
133980119
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133980119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF4153
Amastin
Motif
Other DBs
NCBI-GeneID:
133980119
NCBI-ProteinID:
XP_062274686
LinkDB
All DBs
Position
5:23417545..23420539
Genome browser
AA seq
351 aa
AA seq
DB search
MGRIGKEVAGQVISFIGLVGVSVTCGIPMWRVTNYIGANIVTGQIVWDGLWMNCVTQSTG
QMQCKLNDSVMRLSTDLQAARALVIISILFGFIGFIITFIGAQCTGCLDKDSSKAKVVIV
GGCLIIVAAILVLIPVCWSAATTISDFMNPLTIETQRRELGASIYIGWASAAILLIGGII
LTTSCPPQKRMYGYPGYPPAPMYPYAAPVNPATYASDLQAARALVVIAIILSAFGVLLGI
AGGKCTNFVEEPRAKARVAIASGIVFICAGVMILIPVCWSANTIIRDFYNPLMTNAQRRE
LGAALYIGWGTAAVLLLGGGLLCSSCPPKESPEYPIKYAGARSTATSRAYV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggggaggattggcaaggaagtggccggtcaggtcatcagcttcattggcctggttgga
gtgtcggtgacatgcgggatccccatgtggagagtgaccaactacatcggagccaacatc
gtaacaggccagatagtgtgggatggtctgtggatgaactgtgtgacgcagagcactggg
cagatgcaatgcaaactgaatgattctgtgatgaggctttccactgatctgcaggccgcc
cgagccctggtcatcatttctatccttttcggcttcatcggcttcatcatcaccttcatt
ggagcccagtgcacaggctgcctagataaagattcatctaaggccaaggtggtgatcgta
ggtggctgtctcatcattgttgctgccatcctggtcctgattcctgtttgctggtctgca
gccaccaccatctcagacttcatgaacccattgaccatcgagacacagagaagggaactt
ggggcctccatttacattggctgggcctctgctgccattctcctgatcggtgggatcatc
ttaaccacttcctgccctcctcaaaaacgcatgtatggatacccaggatacccaccagca
cccatgtacccttatgcggcaccagtaaacccagcaacctatgcttctgaccttcaggct
gccagagctcttgtggtcatcgccatcatcctttctgcctttggagtcctcctgggaatc
gctggggggaagtgcaccaactttgtggaggagccacgagccaaagcccgagtggccatc
gcctctggaattgtcttcatctgtgctggcgttatgatcctcatccccgtctgctggtct
gccaacaccatcatcagggatttctacaatccactcatgaccaatgctcagaggagggag
ctgggggctgcactctacatcggctggggtaccgctgcagtgctcctcctgggtggtggt
ctcctctgcagctcctgcccacccaaagagagcccagagtatccgatcaagtacgccggg
gccagatccacagccaccagccgggcctacgtctga
DBGET
integrated database retrieval system
