Scomber scombrus (Atlantic mackerel): 133980130
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Entry
133980130 CDS
T10651
Symbol
phf12b
Name
(RefSeq) PHD finger protein 12
KO
K26244
transcriptional regulatory protein PHF12/RCO1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133980130 (phf12b)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
133980130 (phf12b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHF12_MRG_bd
PHD
PHDvar_NSD
PHD_2
FHA
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
133980130
NCBI-ProteinID:
XP_062274703
LinkDB
All DBs
Position
5:1879726..1890920
Genome browser
AA seq
1030 aa
AA seq
DB search
MWDKMETPTIVYDLDTSGGLMEQIQTLLAPPKSEEVDKRSRKLVRDVRRSGRATNHDTCD
SCREGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCNVRKKKREQKSEQTNGLL
ERSSTKRAASPAVELELNAGPLRLDGLPPGAGAAGPGLRVAQVRLLDRRTSSRPNSRPGT
PTSNTSSTPTPSEEQNDGEEEAAEPEDEVQGAEVESATVSAPAPRLLKRPFQLLIAAAME
RNPTQFQLPSELTCTTALPGSSKRRRKEELLGKPFRRPQHELDTNGLVPLPVKVCFSCNR
SCRLAPLIQCDYCPLLFHMDCLDPPLTALPAGKWMCPNHVEHLALNQRSLSLSSRCQLFD
QFQDRMSQHAVKVDFLRRVHRQNAPNRRTSHQHNKRTIKVPDAIKSQYRNPPTTLLPAGV
RQLELVCSPVPEHQPPKHLTSQAEQKEWLQDVIALQCSIMRHLSTKQKASSTLSPVTLSA
EWDSEQKASIKSCVTSEDIKTQASLGRTASPDPCSKPCSTPDDPQGGSVSRDTPAELGAC
KCSMKPCQNCRKPNGPLAEEGQPPKANGPIDCHSSSESCRQTELQQRLKPSTIPDPAASS
GLVNHIGTETVKKEPESTTEACTQKHCPAAPTLWPHSGQQNHRSSDEKPSFSLTSSAHSA
STPKGSQVHDSSKLGSSTPTPDIKAGPGLMDSLLPSTLSSFANLSSCMKEGLDEDGRIEL
DKLDTEMIKLLAWQRIQQLFPCKAPSAPPLPPPLPPPPANSAAPKNPSPHPDSQKKVQAR
AVFYPLTGKGGAVSMCYRTLYIGSGADMDVCLTNYGHCNYISGKHACIFYDENTKHYELL
NYSEHGTTVDNVLYSCDFSEKASPSPPSGLVAKVQGIIRRSKKREEDEGPTSVVGLLPAG
GVMSSQPQGGSELTCSCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQFVFSITEFAS
KQPKEEQTATPAAGCTSSSSGSTTSTAPTNSTSSLLPNTATASSPSSQDEADNETVPSHQ
VPALHSNSVP
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacaaaatggagaccccgacgattgtgtacgatctggatacctctgggggctta
atggagcaaatccaaacactgctggctcccccgaagtccgaggaggtagacaagaggagt
cggaagttggtaagggacgtccggaggagcggcagggccaccaaccacgacacctgcgat
agctgccgggagggaggagatctgctgtgctgtgatcactgtcctgcagccttccacctc
cagtgctgcaacccacctctgagcgaagaaatgcttcctccaggagaatggatgtgtcat
cgctgcaatgttcgcaaaaagaagagagagcagaagtcagaacagactaacggcctactg
gaaaggtcctccactaagcgagctgcatccccggctgtggagctggagcttaacgccggc
ccgctacggctcgacggcctgcccccgggggccggagcggcagggcccggtctacgagtg
gcccaggtacgcctcttggatcgcaggaccagcagcagaccgaacagccggcccggcacg
cccacctccaacacctcgtccaccccgactccctcagaggagcagaacgacggggaggag
gaggcggcggagcctgaagatgaagttcagggcgcagaggtggagagtgctacagtatct
gctccagcaccacgcctcctcaagagacccttccagctgctaatagcagccgctatggag
agaaaccccacacagttccagctgcccagtgagctcacctgtaccaccgcacttccaggc
agcagcaaacggaggagaaaagaggagttactagggaagccattccggaggccacagcac
gaactggataccaatggtctggtccctctaccagttaaagtctgcttctcatgcaacagg
agttgcaggttggctccattgatccagtgtgactattgtccccttctgttccacatggac
tgcctggaccctccacttacagccttacctgctggcaaatggatgtgcccaaaccatgtg
gagcacttagcgctgaatcagaggagcctgagcctgtccagtcgctgtcagctcttcgac
cagttccaggaccggatgtcccaacacgccgtcaaggtggacttcctgcgtagagtccat
cggcagaacgcacccaaccgacgcaccagtcaccagcacaacaagaggaccatcaaggtg
ccagatgccatcaagtctcagtacaggaatcctcccaccacactgcttcctgcaggggtg
cgtcagctggagctggtctgtagccccgttcctgaacaccagcccccaaagcacctcacc
tcacaagcagagcagaaggagtggcttcaggatgtcatcgccctccagtgcagcatcatg
cgacacctatcaaccaagcaaaaggcttcatctacgctgtcacctgttacattgtcagca
gagtgggactctgagcagaaagccagtattaaatcttgtgtaacatcagaggacattaaa
actcaggcctctttaggaaggactgcttcccctgacccctgctctaaaccctgcagtaca
cccgatgacccacaggggggctctgtatcacgggacaccccggcagagctgggtgcttgt
aaatgcagcatgaaaccctgccagaactgtaggaaacccaacggacctctagcagaggag
ggtcagcctcctaaagccaatggacccatagactgtcacagctcgtcagaatcctgcagg
cagacggagctgcagcaaagactgaagcccagcacaatcccagacccggctgcttcttcc
gggctggtcaaccacataggaacagaaacggttaaaaaggagcctgagagcactacggag
gcctgcactcagaaacactgccctgccgcgcccacgttatggccccacagcggccagcag
aaccacaggagcagcgacgaaaaaccctccttctccctcaccagcagtgcccactcagcc
tcaacacctaaaggcagccaggtgcacgactcaagcaagctgggatcatccacaccaact
ccagatataaaggctggtcctggactgatggactcactgctgcccagcactctctcctcc
tttgctaacctgtccagctgcatgaaagaggggttggatgaagatgggaggatcgagctg
gacaaactggacacagagatgatcaagctgctggcctggcagaggattcagcagctcttc
ccctgcaaagcgcccagtgctcctcctcttcctcctcctcttcctcctcctccagccaac
agcgctgccccaaaaaacccatcaccccaccctgatagtcagaagaaggtgcaggcccga
gcagtcttctaccctctgacaggaaaaggaggagctgtcagtatgtgttacaggacgtta
tatataggctcaggtgctgacatggacgtgtgccttacaaactacggtcattgtaactac
atttcggggaaacatgcctgtatattctatgatgagaataccaagcattacgagctgctc
aactacagcgagcatggcaccacggtggacaacgtcctctactcctgtgatttctctgag
aaggcctcgccgtctccacccagcggcctggtggccaaagtccaaggcatcatccgtcgc
agtaagaagcgggaggaggacgagggtcccacgtctgtggtgggtttgttgccggccggc
ggggtgatgagcagtcagcctcagggcggctcagaactgacgtgcagctgcaaggcgagc
agctccagcctgatcggaggcagcggggcaggctgggagggcacggcgctgctccaccac
ggcagctacatcaagctgggctgcctccagttcgtcttcagcatcaccgagttcgccagt
aagcagcccaaagaagagcagaccgccacgcccgccgccggctgtacgagcagcagcagt
ggcagcactaccagcaccgcccccaccaactccacctcctcacttcttcccaacactgcc
acagccagcagcccctccagccaggacgaggccgacaacgagactgtcccctctcaccaa
gtgcccgcactgcactccaactctgttccataa
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integrated database retrieval system
