Scomber scombrus (Atlantic mackerel): 133980133
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Entry
133980133 CDS
T10651
Symbol
pipox
Name
(RefSeq) peroxisomal sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00260
Glycine, serine and threonine metabolism
ssco00310
Lysine degradation
ssco01100
Metabolic pathways
ssco04146
Peroxisome
Module
ssco_M00974
Betaine metabolism, animals, betaine => glycine
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
133980133 (pipox)
00310 Lysine degradation
133980133 (pipox)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133980133 (pipox)
Enzymes [BR:
ssco01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
133980133 (pipox)
1.5.3.7 L-pipecolate oxidase
133980133 (pipox)
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Gene cluster
GFIT
Motif
Pfam:
DAO
HI0933_like
GIDA
NAD_binding_8
Pyr_redox_2
Thi4
Pyr_redox_3
FAD_oxidored
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
133980133
NCBI-ProteinID:
XP_062274705
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Position
5:complement(1554770..1602088)
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AA seq
388 aa
AA seq
DB search
MSTKEEYDCIVIGAGVQGSFTAYQLAKNNKKTLLLEQFVLPHTRGSSHGQTRIIRKAYEQ
DFYTHMMEECYQLWAQLERETGVKLYRQTGLLVMGPEKSENYQMFKNTLQKNKVPTVVLS
RDNFSQHIPHVTLAEGDGAVVDITAGVLYADRALRTVQGQFQKLGGVIRDKEKVTDIKPG
PTVKVSTSAGVYGAKSVVITAGPWANRLLAHTGLQLPLEVVKINVCYWKEKVPDTYNVKK
RFPCFLLTEGEEANEHIYGLPSNEYPGLVKICYHMGSVTDPDQRDKQTDRSDIDILQRYV
ARCLPKLDPEPAVVETCMYTLTPDRHFVLDCHPAHRNIVIGAGFSGHGFKFGPIIGKLLC
ELSLGEVPSYDLSPFRIRRFQANPKSAL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactaaagaggagtatgactgcatagtgatcggggccggggtccagggctctttc
acggcttatcagctggcaaagaacaacaagaagactcttctgctggagcagttcgttctg
cctcacactcgagggagctcccatggccagacccgcatcatccgcaaggcctacgagcaa
gacttctacacccacatgatggaggagtgctaccagctgtgggctcagctggagagggag
actggtgtcaaactgtacagacaaacaggactcctggtgatgggaccagagaaaagtgag
aattaccagatgtttaagaacaccctgcagaagaacaaggttcctactgtggtcctgagc
cgtgacaacttcagccagcacatcccccatgtcacccttgctgaaggagacggagcagtg
gtggacattactgctggagtgctgtatgcagaccgagcactcagaactgtacaggggcag
tttcagaagttgggtggtgtcatcagagacaaagagaaggtaacagacatcaagcctggc
cctactgtgaaggtgtcaacttctgctggtgtttatggagccaagagcgtggtgatcact
gctggaccctgggccaacagactgctggcccacactggcctacagctaccactagaggtg
gtaaagattaacgtgtgctactggaaagagaaagttcctgacacatataacgtgaagaag
cgctttccctgcttcttactgactgagggagaggaggccaatgagcacatctacggcctc
ccatccaatgagtacccaggcttggtgaagatatgctaccatatgggcagtgtgacggac
ccagaccagagagacaagcagacagacaggtctgacatcgatatcctccagcgctacgtg
gcccgctgtttacctaaactggatcctgaacctgccgtggtggagacctgcatgtatacg
ctcacaccagaccgtcattttgtgctggactgccaccccgcccatcgtaacattgtgatt
ggagcaggattctcaggtcatggcttcaagtttggaccaatcattggcaagctgctgtgt
gagctcagcctgggagaagtgccgtcctacgacctttcacctttccgtattagacgcttc
caggccaaccccaaatcagctttgtag
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