Scomber scombrus (Atlantic mackerel): 133980172
Help
Entry
133980172 CDS
T10651
Symbol
pax3b
Name
(RefSeq) paired box protein Pax-3b isoform X1
KO
K09381
paired box protein 3/7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133980172 (pax3b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133980172 (pax3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_32
HTH_23
HTH_SB
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
133980172
NCBI-ProteinID:
XP_062274763
LinkDB
All DBs
Position
5:6034232..6059064
Genome browser
AA seq
494 aa
AA seq
DB search
MTALAGSIPRMMRPTLAQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVDRRIEE
YKRENPGMFSWEIRDKLLKDGICDRNNVPSVSSISRIMRSKFGGKGDEEEDEDEIEKKEL
EENERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSIPPYQLSDSAYPPSSIAQDPPSTLHRPQPLPPSSGHQASGGGGQGDGGSAYCLASGRH
SFSGYSDSFVSPGGPANPMNPSIGNGLPPQVMGLLNPGGVPHQPQSDYAISPLTGGLEPP
AGMAASCSQRMDHIKGLEGLTSVPSMSALPSLPSSQSYCPTSYSSPGYTVDHVASYQYGQ
YGQSALSYLRPEIT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggcggggtcaatacccaggatgatgcgacccacgctggctcagaattac
ccccgcagtggcttcccactggaagtgtctactccgttgggtcaaggccgagtgaaccag
ctcggtggagttttcataaatggcagacctttgcctaaccacatccgacacaagatcgtg
gaaatggcccaccacggcattaggccctgcgtcatctcccgacagctccgggtctctcac
ggctgcgtgtccaaaatactttgccggtaccaggagacgggctccatcagacccggggcc
atcggtggcagcaaacccaagcagggaacgacgccggacgtagacaggagaatagaagaa
tacaagcgggaaaacccgggtatgtttagctgggagattcgggataaattactgaaggat
gggatatgtgaccgcaacaacgttccttcagtgagctccatcagtcgcatcatgcggagt
aagttcggaggcaaaggcgatgaagaggaggatgaggatgaaatcgagaagaaagagctg
gaagaaaacgagcgaagggccaaacacagcatcgaaggcatcttaggagacagatcgagc
cactctgacgagggttcggacgttgagtcggagcctgatctgccactgaagaggaaacag
cggcgcagtcggaccaccttcacggccgagcagctggaagagctggagagggccttcgag
agaacccactaccccgacatctacaccagggaggagctcgcccaaagagccaaactcact
gaggccagggtgcaggtatggttcagcaacaggcgggcaaggtggaggaagcaagcggga
gccaatcaactgatggcgtttaatcacctgatcccagggggtttcccaccctcagccatg
tccagcatccccccataccagctctctgacagcgcctaccccccctcatcaatagcacaa
gatccccccagcacgttgcatcggccccagcctctccctccctcctcgggccaccaggct
tccggcggtggaggacagggagacggaggctctgcctactgcctcgcctccggacgccac
tccttctcaggatactcagacagctttgtgagccccggaggaccggccaatcccatgaac
ccctccataggaaatggactccctccacaggtgatgggtctgctgaaccccggcggcgtg
ccacatcagccccaaagcgactacgccatctcccctctgacgggcggcctcgagcccccc
gccggcatggccgccagctgcagccagcgcatggatcacatcaagggactggagggtctg
accagcgtcccctccatgtccgctctgccctccctgcccagctcccagtcctactgcccc
acctcctacagctcacccggctacacagtcgaccacgtggcgtcctaccagtacggccag
tacggacaaagtgccctttcttatctgaggcctgaaatcacctga
DBGET
integrated database retrieval system
