Scomber scombrus (Atlantic mackerel): 133980194
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Entry
133980194 CDS
T10651
Name
(RefSeq) EH domain-containing protein 2-like
KO
K12469
EH domain-containing protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133980194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133980194
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
133980194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
Dynamin_N
EHD_N
MMR_HSR1
EF-hand_1
GTP_EFTU
EF-hand_7
EF-hand_6
AAA_28
AAA_22
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
133980194
NCBI-ProteinID:
XP_062274795
LinkDB
All DBs
Position
5:complement(25838970..25841798)
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AA seq
543 aa
AA seq
DB search
MSIRRLRRNPKTPGDVNMVTEELRNLYYKRLLPIEKYYSFHHFHSPSYEDADFDNKPMVL
VIGQYSTGKTTFIRYLIEQDFPGSRVGPEPTTDCFTAVMHGEVEEMIPGNALTVDPKKPF
RNLDPFGNGFLNRFQCVQTPNKVLESISIIDTPGILTAAKRKLSRGYDFPAVLRWFAERV
DRIILLFDAHKLEFSDELTRAFGALCGNEDKLRVVLNKADRVDSQQLMRVYGALMWSLGK
VFRTPEILRVYIGSFWSEPRQVCDHYELIELEEDDLLADIRNLPRNAAVRKLNDLVKRAR
LVRAHAHIISYLKQEMPTIFCKESKKHNLIYQLPVIFTKIQKQHRVPAGDFPDCTKMQER
LLGQDFSKFKTLKPSLMASLDKLLSTDIANLVPLIQQQELRKKSLHGMMDGEFLGTFRPE
HYRRDPFKELKDDDSNEIDSNEWVVERYKPKYDEIFYNLSPKEGKLNGTKVKEWMTTILL
PNSVLAHIWRLSDVDGDGMLDNEEFALAVYLIEAKLEGHWLPQELPSHLVPPSKRPRTAS
DEE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccggaggcttaggagaaaccctaaaacacctggggatgtcaatatggtgaca
gaagagttgagaaatctttattacaagaggctgctgccgatagagaaatactattctttt
catcacttccactctccgagctatgaggatgcagactttgataacaaacccatggtgctg
gtgataggtcagtactcaacaggaaagacaacttttatcaggtatctaatagaacaagat
tttcctggtagcagagttgggccagagccaaccactgactgcttcactgctgtcatgcat
ggagaagtggaagaaatgatccctggtaatgctcttacagtggatccaaagaagccgttt
cgcaaccttgacccttttggaaatggctttctgaacaggtttcaatgtgttcagacacca
aacaaggtccttgagagtatcagcattatcgacacaccaggcatcttgactgcagctaag
agaaaactaagccgaggctatgacttcccagcagtgctgcgctggtttgcagagcgtgtg
gatcgaatcatcctgctgtttgatgcacataaactggagttctctgatgagctcactcgg
gcctttggggctctgtgcggcaacgaggacaagttgcgtgtagttcttaacaaagctgac
agggtggactctcagcagctcatgagagtgtacggcgccctcatgtggtcactggggaaa
gtgtttcgaacccccgagatcttgcgggtttacatcggatctttctggtcagagccgagg
caggtgtgtgaccactacgagctgatagagctggaggaggacgatctcttggccgacata
aggaatctgccacgcaatgctgcagtgcgaaaactgaacgacttggtgaagagggcacgc
ttagtgagggctcatgcacacattatcagctacctgaagcaggagatgccaaccattttt
tgcaaagaaagcaagaagcacaatctgatctaccagcttcctgtaattttcaccaagatc
cagaaacaacacagagtcccagctggtgacttccctgactgcaccaagatgcaggaacga
cttttgggtcaagatttctcaaaattcaagacactaaaaccaagtctgatggcttctttg
gacaaactcctgagcactgacatagcaaatctggtgcccttaatccaacaacaagaactg
aggaagaaatcacttcatgggatgatggatggtgaatttctgggaacattcaggcctgag
cattacaggagagatcccttcaaggaactcaaagatgatgacagcaatgaaatagattcc
aatgagtgggttgtggagaggtacaagccaaagtatgatgagattttctacaacctcagt
ccaaaggagggcaaactgaatggcaccaaagtcaaagagtggatgacaaccatccttctg
cccaactctgtgcttgctcatatctggaggctgtctgacgtagatggtgatggcatgcta
gacaatgaggagtttgctttggccgtctaccttattgaagcaaaactggagggacactgg
cttccccaagagcttccttctcatctggtgccaccgtcaaaacggccgcgtacagccagc
gatgaagagtaa
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