Scomber scombrus (Atlantic mackerel): 133980198
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Entry
133980198 CDS
T10651
Symbol
pabpn1l
Name
(RefSeq) embryonic polyadenylate-binding protein 2
KO
K14396
polyadenylate-binding protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133980198 (pabpn1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133980198 (pabpn1l)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133980198 (pabpn1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
133980198
NCBI-ProteinID:
XP_062274821
LinkDB
All DBs
Position
1:23591912..23595216
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AA seq
263 aa
AA seq
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MAENHLEYGYLEGESIVEHFAEDPELAAIKARVQELEMEEETERLKEEEERCDAAEMQLL
TSSPRPGPFYNMTPEERIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFT
GHPKGFAYIEFSDRDSVQSAIGLHETLFRGRVLKVMPKRTNMPGISTTDRGGHRGGHTRG
RGRGFRPPRYQNSSRGRFRYQSTRPQHQTPHPYYGGPSVGKRQWGNMDYHEQMPKRYPCL
LLITPPSEELGAGSSGQHYPQQR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatcatctggagtacggctacctggagggcgagtccatcgtggagcatttc
gccgaggacccagagttggcggccatcaaggccagagttcaggagctggagatggaagaa
gagacagaaaggctgaaggaggaggaggaaagatgtgatgctgcagagatgcagcttctg
accagcagcccgcggcctgggcctttctacaatatgactcctgaggagaggatagatgca
gacaacagatctgtctatgtaggaaatgtagactatggagctactgccgacgagttggag
atccattttaacggctgtggtcccgtcaaccgagtgaccatcttgtgcgaccggttcacc
ggccaccccaaaggctttgcctacattgagttctcagatcgtgactctgtgcagagtgct
attggtttacacgagaccttgttcagaggaagagtccttaaggtaatgcctaagaggact
aacatgccagggatcagcaccacagacaggggagggcaccgaggtggccacaccagaggc
agaggacggggcttccgtccaccccgataccagaacagctctcggggcaggttcaggtac
cagtcaaccagaccacaacaccaaacaccccacccttactatggaggcccatcagtgggg
aagagacagtggggaaacatggattaccatgaacagatgcctaaacgttacccatgtctt
ctcctcatcaccccaccatcagaggagttgggggcagggtcgagtggacagcattacccc
cagcagcgctag
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