Scomber scombrus (Atlantic mackerel): 133980218
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Entry
133980218 CDS
T10651
Name
(RefSeq) claudin-8-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecules
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133980218
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133980218
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133980218
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133980218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133980218
04147 Exosome [BR:
ssco04147
]
133980218
04515 Cell adhesion molecules [BR:
ssco04515
]
133980218
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133980218
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133980218
Exosomal proteins of colorectal cancer cells
133980218
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133980218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Abhydrolase_5
LPAM_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
133980218
NCBI-ProteinID:
XP_062274855
LinkDB
All DBs
Position
5:20825494..20826183
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AA seq
229 aa
AA seq
DB search
MRAKLEVFATVLGFIGLIGTVAVTAIPMWRVSAFIGANIIVMEELWEGLWMNCYRQADIK
MQCKVYDSLLILPPELQAARGLMCVSIVLVVISLSVTGCGTKKSSCCDDDMKSKNITIAL
GGSLYLLSCLTTLIPVSWVGHTVIRNFYNTQVMDSQKRELGEALFLGWATSGILLIAGII
FLFSYCKRSSKEEEPSTEMSLMAGKDGLKANSVYLERTPSSFYKQQEYV
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaaaattggaggtctttgccacagtcctgggcttcattggcctgattgggact
gtagccgtcactgccattcccatgtggagggtctccgccttcattggtgctaatattatc
gtcatggaggaactctgggaaggcttgtggatgaactgctacagacaagctgacatcaag
atgcagtgcaaggtgtatgactcgctgctaattctccctccggagctgcaagccgccagg
gggcttatgtgtgtctccatagtcctggttgtcatctccttgtcggtcacaggatgtggg
accaagaagagcagctgttgtgatgacgatatgaagagcaagaacatcaccatagcttta
ggggggtctttgtatctgctttcctgtttgaccacactcatccctgtcagctgggtgggc
catactgttatacgcaatttctataacacacaggtcatggattctcagaagcgagaacta
ggggaggccctcttccttggctgggccacctctggtattttgctgattgctgggatcatc
tttctgtttagctactgcaaacggagctcgaaggaggaagagccgtccactgaaatgtct
ttaatggcgggaaaggatggactgaaagcgaacagtgtgtacctggagaggaccccatcc
agtttttataagcagcaagaatatgtttaa
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