Scomber scombrus (Atlantic mackerel): 133980230
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Entry
133980230 CDS
T10651
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133980230 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133980230 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133980230 (zgc:162872)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
133980230 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133980230 (zgc:162872)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133980230 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_5
BAR
PH_8
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
133980230
NCBI-ProteinID:
XP_062274873
LinkDB
All DBs
Position
5:complement(31658566..31672185)
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AA seq
739 aa
AA seq
DB search
MDSLLDFEECIKDSPEFRLNLDQFETEVTVLDTQLDKVMKLCGKMVEAGQAYSAANQLFL
SGLAELSMSRKKDSVITNCLNQFNQGLQEMVNFHTMLFDQTQRAISHQLINLCTQFLPQL
AETRKEFVRIGDDLETAAMKNAQVSRHKTADAERASHLLLATRKCYQHFALDYCLQLNTF
KTQQRIDILNSVFSFVHAQFTFFHQGFDLLRDLEPTMKTMAAQLSQLSSDCAAKRKDLEN
KHLLVQQRDASGEPMVVPCPGSNDIIQGYLFKRSRRKTKTWKRCWFSIRDNQLIYRKSHK
EDSMVLFEDLRLCAVKSLEHIDRRFCFELLSVQKCCALQADSEQLKQAWLSAVQGSIDLA
YREKADIQLTQPKEPLPLMSPGDNSPGPPPRRPPALGVALRGPGNHRCCDCSEEEPRWAS
INLGVTMCIECSGIHRSLGVHLSKVRSLTLDSWETEQLKLLCVLGNDVINRIYEAGCSES
GRVKPSTDSPRAEKETWIKEKYVEKRFVQNGGSDNSKRGKDEAGLRLYLAALAGDPVAMA
AALAQGAEVNGSVAEEEGRTALIGAAVGGSLLACEFLLLNGANVNHRDLRGQGALHAAAT
AGHTGQVCLLLKRGANQYAVDERGQDPLAIAVETAHADIVTLLRMARMNEEMRDSEGMFG
AMGDDETFQEIFRDFSDMASHDPDKLSRRKFSRGVDEEEEDEEGGRGGGRGGGRGGGGGG
GGGRGGGRVNNQQSVEKTE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggactcgctgctggactttgaggaatgcatcaaagactctcctgagttcagactgaac
ctggatcagtttgagactgaagttactgtgctggacacacagctggacaaggtgatgaag
ctgtgcggtaagatggtggaggcgggacaagcgtacagcgcagccaatcagctgttcctg
agcggcctggcggagctctccatgtcccgcaagaaggacagcgtcatcacaaactgtctg
aaccagttcaaccagggcctgcaggaaatggtcaactttcacactatgctgtttgatcag
actcagagagccatcagccatcagctgatcaacctctgtacacagttcctcccccagctg
gcagaaaccaggaaggagtttgttcgtatcggagacgatctggagacggcggcgatgaag
aacgctcaggtttcccgccacaaaaccgccgacgctgagcgggcgagtcacctgctgctc
gccacgcggaaatgctaccaacacttcgccctggactactgtctgcagctcaacactttc
aagactcagcagaggatcgacatcttaaactcagtcttctccttcgtccacgctcagttc
actttcttccatcaaggcttcgacctgctcagagacctcgagcccaccatgaagaccatg
gcagcacagttgtcgcagctgtcgtcggactgcgcagctaaaagaaaagacctggagaac
aaacacctgctggtccagcagagggacgcttcaggagagccgatggtcgtcccgtgtccc
ggcagcaatgacatcatccagggttacctcttcaaacgctcccggaggaaaaccaaaacc
tggaagagatgctggttttccatcagagacaaccagctcatctacaggaaatcacacaag
gaggactccatggtcctgtttgaggatctcagactgtgtgctgttaaatctctggagcac
atcgaccgacgcttctgcttcgagctgctttctgttcagaagtgctgtgctctgcaggcg
gactcggagcagttgaagcaggcctggctcagcgctgtgcagggaagcatcgatctggcc
tacagagagaaagccgacattcagctcacacagcctaaagagcccctccctctcatgtct
cctggggataactcaccgggccccccccctcgcaggccgccggcgctgggtgtggccctg
cgtggccccgggaaccatcgctgctgtgactgcagcgaggaagagcctcgctgggcctcc
atcaacctgggagtcaccatgtgcatcgagtgctcggggatccacaggagtcttggcgtt
cacctgtccaaggttcgatctctcactctggactcgtgggagaccgaacagctcaagctg
ctgtgcgttctgggaaacgacgtcatcaaccggatctacgaggctggatgttcagagagc
ggacgagtcaaaccttcgacggacagtccgcgagcagagaaagaaacgtggatcaaagag
aaatacgtggagaagagattcgtgcagaacggaggctcggataattccaagcgtgggaag
gacgaggccgggctgcgtctgtatctggctgcgttggcgggagacccggttgccatggcg
gcggcgttggcccagggggcggaggtcaacgggagcgtcgctgaggaggagggacgcacg
gcgctgatcggagctgctgtcggggggtcgctgctggcttgtgagtttctgctgctgaac
ggagcgaacgtcaaccacagagacctgagaggacaaggagctctgcacgctgctgccacc
gctggacacacgggacaggtgtgtctgctgctgaagagaggagccaatcagtacgctgtg
gacgagagaggacaggacccgttggccatcgccgtggaaacagcccacgctgacatcgtc
acgctactgcggatggccagaatgaacgaagagatgagagattcagagggaatgtttgga
gctatgggagacgacgagacgtttcaggaaatcttccgcgacttcagcgacatggcgtca
cacgacccggacaaactcagccgacggaagttcagccgcggagtcgacgaagaggaggag
gatgaagagggaggaagaggaggagggagaggaggagggagaggaggaggaggaggagga
ggaggaggaagaggaggaggaagggtaaacaaccaacagagtgttgaaaagactgaatga
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