Scomber scombrus (Atlantic mackerel): 133980232
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Entry
133980232 CDS
T10651
Symbol
vtna
Name
(RefSeq) vitronectin a
KO
K06251
vitronectin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04512
ECM-receptor interaction
ssco04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133980232 (vtna)
04518 Integrin signaling
133980232 (vtna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133980232 (vtna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133980232 (vtna)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133980232 (vtna)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133980232 (vtna)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133980232 (vtna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
133980232
NCBI-ProteinID:
XP_062274876
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Position
5:12308441..12312509
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AA seq
569 aa
AA seq
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MRLLAVLLLVLIAETFAADESCMGRCENGFDSKKECQCDSMCKYYKSCCSDYEVTCGMTT
RGDTFVLAEDDDNSEQVDSVTPSPGYSADDKSLPARSRKLIPTPTPISDFAHRPAQRPET
TLKMTKPPQVFDTTIQRAPPTVPPTPEVPNATETPEIDTTTTAPVTEATTEAPDPDAVVC
SDRPFDSFMQLKNGSIYAFRGDFFFELDQKTVLPGYPKLIKDVWGIRGPIDAAFTRVNCQ
GKTYIFKGNRYWRFDDGVLDEDYPRDISVGFDKVPDHVDAVFALPASNHHGKEKVYFFKG
DQYYLYEFLHQPSHEECITMSESSPSVLFRRYTDLYYSNYERVFSELFSDLPQHHDKHHF
INKDWKGLKSPVDAAMAGRIYVTPLRSEPGRNDQPDQQWGQQQGQQWNQQYGQQWNQQYG
QQWGRRRQSRSPSWGSMSGQGMNMGRDFAERGMDMGLRMAEKRMEMEERLGREWSRRWDQ
DWDQDRRRDGYRQNNRGNYDSRDNRRDDRSNWDLTQRNLPMQSVYFFKGAKYYRVDLSTK
RVDHAVPPYPRSIAKYWLGCSDPTGAEKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcctggcggtcctgctgctcgttttgatcgcagagactttcgctgcagatgaa
tcttgtatgggtcgctgtgagaatggctttgactccaagaaggagtgccagtgtgactca
atgtgcaagtattacaagagctgctgttctgactatgaggtcacctgtggcatgacgact
cgaggagacacatttgtgttagctgaggatgatgataacagtgagcaggttgacagtgtg
actccctcccctggatattcagcagatgacaagtctttacctgccagaagtcgtaagctc
attcccacaccgacgcccatatcagacttcgctcacagaccagcgcagcgtccagaaacc
acattgaaaatgaccaaacctccacaagtgtttgacacaaccattcaaagagccccccct
acagtcccacctacaccggaggtccccaacgcaactgaaacccctgagattgacacaaca
accaccgctccagtcacagaggccaccactgaagcccctgacccagatgctgtggtctgc
agtgacagaccttttgactcctttatgcagctaaaaaatggctccatctatgccttcaga
ggggacttcttttttgagctggaccagaaaaccgtgcttcctggttatccgaaactcata
aaagatgtgtggggcatcagaggtcctattgatgccgccttcacacgtgtcaactgtcag
gggaagacctatatcttcaagggaaacaggtactggaggtttgatgatggcgtgctggat
gaagactatcctcgagatatcagtgtgggttttgataaggttcctgatcatgtggatgca
gtgtttgctctccctgcttccaatcaccatggaaaagagaaggtgtattttttcaaaggg
gatcagtattacctttatgagtttttgcaccagccgtcccatgaggagtgtatcaccatg
tccgagagttctccatccgtactgttcagacgctacactgacctgtactatagcaactat
gagcgtgttttcagcgagctcttctctgacttgcctcagcatcatgacaaacaccacttc
attaacaaggactggaagggcctcaagtctccagtggacgccgccatggccggcagaatc
tatgtcacacccttgaggtcagagccaggccgcaacgaccagcctgaccagcagtggggt
caacaacaaggccaacagtggaaccagcagtacggacagcagtggaaccagcagtacgga
cagcagtggggtcgcaggagacaaagccgttcaccctcctggggctccatgtctgggcag
gggatgaacatgggccgggactttgctgaaagggggatggatatgggtctaagaatggca
gagaagaggatggaaatggaggagaggcttggacgagaatggagcagacggtgggatcaa
gactgggatcaggatagacggagagatggttaccgccagaacaacagaggcaactatgac
tccagagacaaccgcagagatgacagatcaaactgggatttgacccaaaggaatctgccc
atgcagagcgtctacttctttaaaggagctaagtactacagagtggacctcagcactaag
agagttgaccacgctgtgcctccatatcccagatccatcgccaagtactggctcggctgc
tcagaccccactggagcagagaagaagtag
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