Scomber scombrus (Atlantic mackerel): 133980247
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Entry
133980247 CDS
T10651
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
133980247 (vps35)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133980247
NCBI-ProteinID:
XP_062274893
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Position
1:complement(2325461..2341666)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPEGTEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQVVLAGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPTEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLTNTLDYNTTIVSQEQVDAILNLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPVYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacacagcagtctcctcaggatgagcaggagaagcttctggatgaagctgtg
caggctgtgaaggtccagtcgttccagatgaagcgatgtctggacaagaacaagctgatg
gatgctctgaagcatgcctctaacatgctgggtgagctgaggacctccatgctttctcca
aagagctactatgagctctatatggctatttctgatgaactccactacctagaggtttat
ctaactgatgagtttgccaaaggacgcaaggtggcagatctctatgagctggtccagtat
gcaggcaacatcatcccaaggctctatctgctgatcacagtgggtgtggtgtacgtccgc
tccttccctcagtctcgtaaagacattctgaaggacctggtggagatgtgtcgcggtgtg
cagcatccactcagaggcctcttcctcagaaactatctgttgcagtgcacccgcaacata
ctgccagatgatggagagcagccagaaggaacagaggagatgaccggcgatatcaacgac
tccatcgactttgtccttctgaactttgcggaaatgaacaagttatgggtcagaatgcag
catcagggtcacagccgagatcgagagaagagagaaaaggaaagacaagagctgaggatt
ctggtgggcaccaacctagttcgccttagccagctggagggtgtcaatgtggaaaagtac
aaacaggttgttcttgctggagttctggagcaggttgtgaactgcagagactctttggct
caggagtatctaatggagtgcatcattcaggtgttccctgatgagttccaccttcagact
ctgaaccctttcctgcgttcctgtgctgagctccatcaacacgtcaatgtcaagaacatc
atcatagccctcattgacagacttgccctgtttgctcatcgagaagatggccccggcatt
ccaactgagatcaaactattcgatatcttctctcagcaagtggccactgtcattcagtct
cgccaggacatgccatcagaggacgtggtctctcttcaggtttctctcatcaatctggcg
atgaagtgctaccctgatcgtgtggactatgtagataaggtcctggagagcactgtggag
atattcaacaagctaaacttggaacacatagcgaccagcagtgcagtgtcaaaggaactc
accagactgttgaagatccctgtggacacctacaacaacatcctgacagtgctacagctc
aaacacttccctccgctcttcgagtactttgactatgagtcacgcaagagcatgagctgc
tacgtgctgaccaacacactggactacaacaccaccatcgtgtcccaagagcaggtggat
gccatcttgaacttggtatccacactgatccaggaccagccagaccaaccagctgatgat
cccgaccctgaagactttgctgaggagcagagcctcgtgggtcgtttcattcacctgctc
cactctgaagatccggaccaacagtatctcattctcaacacagcacgcaaacactttggt
gcgggtggaaaccaaaggattcgctacactctccctcctctggtgttcgctgcctatcag
ctggccttcagatacaaagagaactcctcatcggacgacaagtgggagaagaaatgtcaa
aagatcttttccttcgcccaccagaccatcagtgctctaataaaggctgagctcgctgag
ctgcctctgcgactcttcctgcagggggcactggctgcaggagagattggcttcgagaac
cacgagactgtagcttatgagttcatgtcacaggccttctctctgtatgaggatgagatc
agtgactccaaagcccagctggcagccatcaccctgatcatcggtacctttgagcgaatg
cggtgtttcagcgaggaaaaccacgagcctctgagaactcagtgtgcgctggctgcctcc
aagctgctgaagaaacctgaccagtgccgagctgtcagtatctgtgcacacctcttttgg
tcaggacgcagcaccgaaaaaaatggtgaagagatccgtgatggtaaacgggtgatggag
tgtttaaagaaagccctgaagatcgccaaccagtgcatggacccatcactgcaagtccag
ctgttcattgaaatcctcaacagatacgtctgcttctatgagagggaaaatgatgcggtg
actgtccaggtattgaaccaactgatccaaaagatcagggaggatcttcctaacctggag
gcgagtgaggaaacggagcagatcaacaaacacttccacaacacactcgagcatcttcgc
ctgcagagagaatccccagagtctgagggccctgtctatgagggcttggtcctttaa
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