Scomber scombrus (Atlantic mackerel): 133980248
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Entry
133980248 CDS
T10651
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
133980248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133980248
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
133980248
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
133980248
NCBI-ProteinID:
XP_062274891
LinkDB
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Position
5:complement(11923515..11939805)
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AA seq
665 aa
AA seq
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MFLVALSFAYFAKALSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSHFG
AKLHRPKIIAVGCVLMSIGTFIIALPHFIIGRYEFETSVRWVVNSTLNPSPCPVGISADL
IKDGKLVPAKGCEGDSNLSMWIYVLLGNVLRGIGETPVQPLGISYIDDFASEENAALYVG
CVQTISVVGPVFGYLLGSLCAKIYVDIGFVKMETITITPSDARWVGAWWLGYLIAGVITL
LSAIPFWFLPRSLPMSGSRGPEKPEQTSFIKDSPFGKHKYPADEHASFLEMAKDFIPTLR
TLLGHPVYLIYLCVTIIQLNSLIGMVTYKPKYIEQHFRQSASKANFLMGVINIPAVALGM
FSGGLLMKRLKLNLMGAAKFAFGTSLIGYILSLFFFAMSCENAKVAGVTLSYNSVEGISY
DKHPVFTACNSDCSCSASDWDPVCGENGITYVSPCLAGCSGSAGSGKNTVFSNCSCVGVA
GNFTASTGQCPNKDDCDRMFPYFLGLSVITSFIISLGGTPGYMILIRCIKPQLKSLALGF
HALATRTLAGIPAPIYFGAIIDTTCLKWGHKRCGGIGACRIYNTTAYRIAYLGLTLSLRT
ISFVICIPGFILLSRQLKEEERNAIHGALANGGTELEALRKEELISNSDQSQRTADNSTD
RETRL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtttttggtggctttgtcctttgcctactttgcaaaagctctgtcggggagctacatg
aagagcacaataactcagctggagaggcgctttgacatccccagttacctaataggtgtc
attgacgggagcttcgagataggtaacctgttggtgatcgctttcgtcagtcactttggc
gccaagctccataggccaaagatcattgcagtaggttgtgtactgatgtccattggcacc
ttcattattgcgctgccacacttcatcattggacgctatgaatttgaaacatcagtgcgg
tgggtagtgaactcaactctgaacccctctccgtgcccggtgggcatatcagctgacctt
atcaaagatggtaaactggtgccagctaaaggttgcgagggagattccaacctgtccatg
tggatctacgtgctcctgggaaatgtcctgcgggggattggagaaacgcctgttcagcct
cttgggatctcttatatagatgattttgctagtgaggagaatgctgcgctatatgttggc
tgtgtgcagaccatttcagtggttggccctgtgtttggctacctactgggctccctttgt
gccaaaatatatgtggacattggatttgtgaaaatggaaaccatcacaatcactccatca
gatgcccgctgggttggggcctggtggctgggctacctcatagctggggtcatcaccctg
ctttctgcaatcccattctggtttctgccccgctccctgcccatgtcagggtcccgaggc
ccagaaaagccagagcagacaagtttcattaaagactctcctttcgggaagcacaagtac
ccagcggatgaacatgctagtttcctagaaatggccaaagactttattccaaccctgcga
actctgttggggcaccctgtatatttgatctacctgtgtgtgacaatcatccagttgaac
tctcttattggcatggtcacgtacaagccaaagtatattgaacagcacttcaggcagtct
gcatcaaaggccaatttccttatgggtgtgatcaatatcccggctgtagcgctggggatg
ttttctggtggtctgctgatgaaaagactgaagctgaacctcatgggagcagccaagttt
gcctttggcacatccctgattggttatatcctgtcgctgttcttctttgccatgagctgt
gagaatgccaaggtagccggggtgacgctttcttacaacagtgtggaagggatatcttat
gataaacaccctgtgttcactgcctgcaactcggactgctcatgttctgcaagtgactgg
gacccagtctgtggagagaatggcatcacgtatgtttctccctgccttgctggctgcagc
ggctctgctggctcagggaaaaacacagtcttctctaactgtagctgtgtcggtgtggcc
ggtaactttacggccagtacaggtcaatgtcctaacaaggacgactgtgacaggatgttc
ccgtacttcctgggtctctctgtcatcacttcctttatcatctccctcggtggaacacca
ggctacatgattctcatcaggtgcattaaaccacagctgaaatctttggccttgggtttc
catgctctagcaacacgtacacttgcagggatcccagcacccatctactttggagcaatc
attgacaccacatgtctaaaatggggccacaagaggtgtggaggcataggagcctgcaga
atctacaacaccactgcatacaggatagcatacctgggtttgactctgagcctgcggact
atctcgtttgttatttgcatcccgggattcattttgctcagcagacagctgaaggaggag
gaaagaaacgccatccacggagccctggcaaatggcggaacagagctggaggcactcagg
aaggaagagttgatctctaattctgaccagtcacaacgaacagcagacaacagcacagac
agggagacgcggctgtga
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