Scomber scombrus (Atlantic mackerel): 133980261
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Entry
133980261 CDS
T10651
Symbol
foxa3
Name
(RefSeq) hepatocyte nuclear factor 3-gamma
KO
K08038
forkhead box protein A3, hepatocyte nuclear factor 3-gamma
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133980261 (foxa3)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix tissue-specific regulators
133980261 (foxa3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
Forkhead_N
HNF_C
Motif
Other DBs
NCBI-GeneID:
133980261
NCBI-ProteinID:
XP_062274910
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Position
5:23905255..23909675
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AA seq
467 aa
AA seq
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MLSSVKMEAHDIPEWNTFYSEASEMYSSPSTMNSGLGSMGSMGTINSYINLNPATASPAG
MNMAYPSSSLSSSPLASMGSGPGHMSLSPVASSLSSGPLTQLGPAAPGSLGSLSHYQNMG
QSMSQLGYSSTATLSRPGQKEIPPKPYRRSLTHAKPPYSYISLITMAIQQSGSKMLTLNE
IYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPQSGNMFE
NGCYLRRQKRFKIEDKLAKKGGKSQEGGSGKGGHGGDHLEDHSPTGGSEGADSAHSDNSH
PGSSDDQPHSRNSMVPLECPPLSSSHLHSPPVSLTPSSSTSSSIPQSSLSLSATSSSSNP
LLHSQSLPGSTHLLPSSMQQHMDLQSDALKSLDPHYNFNHPFSITNLMSNEQKMDLKSYQ
DQVMAYNSYTGGSPVGAKQIYDSPGPATMDSGAYYQTLYSRSVLNAS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctctgtgaagatggaagcccacgatataccagagtggaatactttctacagc
gaggccagtgagatgtattcctctcccagcaccatgaactctggtctgggctccatgggc
tccatgggcaccatcaacagctacatcaacctgaacccggcaaccgcctcccccgcaggt
atgaacatggcgtaccccagctccagcctcagtagttccccactggcctccatgggctcc
gggcccggccacatgtctctctcaccggtggcctcgtcactcagctcaggtcctctaacc
cagctgggacccgctgctcccggctccctgggctccttgtcccactaccagaacatgggc
cagtcaatgagccagctgggctacagctccactgcgaccctgagccggcccgggcagaag
gagattcccccaaagccttatcgacgctccttgacccacgccaagccaccatattcctac
atctccctcatcaccatggcaatccagcagagtggcagcaagatgctaaccctgaacgag
atctaccagtggatcatggacctgttcccctactaccgtgagaaccagcagcgttggcag
aactccatccgccactcgctctcgttcaacgactgctttgtgaaggtggctcgctcaccg
gacaagccgggcaaaggttcctactggactctgcacccgcagtcaggcaacatgtttgag
aacggctgctacctgaggcgccagaaacgcttcaagatcgaggacaagctggcgaagaaa
ggaggcaagagccaggaggggggctcgggtaaaggaggccacggtggagatcacctggag
gatcacagccccacaggaggatcagaaggagctgactccgcccactcagacaactcccac
ccgggctcttcagacgaccagccgcattcccgaaactccatggttccattagagtgccca
ccgctgtcctcctcacacctccacagcccacctgtctccctgactccgtcctcctccaca
tcatcctccatccctcagtcctccttgtctctctccgccacctcctcctcctccaaccct
ctcctccactcccagtctttaccaggcagcactcacctcctgcccagctccatgcagcag
cacatggacctacagagcgacgccctcaagtctctggacccccactacaacttcaaccac
ccattctccatcaccaacctcatgtccaacgagcagaagatggacctcaagtcctaccag
gaccaggtgatggcctacaacagctacacaggaggctctcctgtgggagccaagcagatc
tacgacagcccagggccagccaccatggactcaggcgcttactaccaaactctgtacagc
cgctcggtgctcaacgcctcctaa
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