Scomber scombrus (Atlantic mackerel): 133980297
Help
Entry
133980297 CDS
T10651
Name
(RefSeq) myosin heavy chain, fast skeletal muscle-like
KO
K24220
myosin heavy chain 1/2/3/4/8/13/7B/15
Organism
ssco
Scomber scombrus (Atlantic mackerel)
Pathway
ssco04814
Motor proteins
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133980297
04820 Cytoskeleton in muscle cells
133980297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133980297
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
133980297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_tail_1
Myosin_N
Rod_CreS
CCDC39
FKBP15
CCDC89
CC_Liprin_beta
OVT1
CEP135_TSGA10_CC
NPHP3_N
AAA_22
Filament
Motif
Other DBs
NCBI-GeneID:
133980297
NCBI-ProteinID:
XP_062274962
LinkDB
All DBs
Position
5:complement(3622220..3633169)
Genome browser
AA seq
1951 aa
AA seq
DB search
MSTDAEMECYGPAAIYLRKPERERIEAQAAFFDAKTSFFVVHKTEMYLKGTLVKREGGKV
TIETEDDKQELTVKEDEIFPRNPPKYDKIEDMVMMTHLNEPTVLYNLKERFSSWMIYTYS
GLFCVVVNPYKWLPVYDAIVVGGYRGKKRIEAPPHIFSISDNAYQFMHTDRENQSILITG
ESGAGKTVNTKRVIQYFATIAAIGAKKAEPVPGKMQVNWLFKIVCQRKVNGSLEDQIVAA
NPLLESYGNAKTVRNDNSSRFGKFIRIHFGSSGKLASADIETYLLEKSRVTFQLSAERSY
HIFYQLMTGHQPQLLEALLITTNPYDYPMVSQGEITVKSIDDVEEFIATDTAIDILGFTG
EEKQGIYKLTGAVMHHGNMKFKQKQREEQAEPDGNEVADKIAYLLGLNSADMLKALCYPR
VKVGNEMVTKGQTVPQVNNAVSALCKSIYEKMFLWMVIRINEMLDTKQPRQYFIGVLDIA
GFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIVWEFIDFGMDLAACIEL
IEKPMGIFSILEEECMFPKASDTSFKNKLHDQHLGKTKAFEKPKPKKGVPEAHFSLIHYA
GTVDYNIQGWLDKNKDPLNDSVIQLYQKASNKLLCFLYAKHGAEEPSGGGKKAGKKKGGS
FQTVSALFRENLGKLMTNLRSTHPHFVRCLIPNESKTPGLMENFLVIHQLRCNGVLEGIR
ICRKGFPSRILYGDFKQRYKVLNASVIPEGQFIDNKKASEKLLGSIDVDHTQYMFGHTKV
FFKAGLLGALEEMRDEKLANLVTMTQALARGYVMRKEFVKMMERREAIFSVQYNIRSFMN
VKNWPWMNLYFKIKPLLKSAETEKELSAMKENYGKMQTDLAAALAKKKELEEKMVSLLQE
KNDLQLQVAAVIENLSDADERCEGLIKSKIQLEAKLKETTERLEDEEEINAELTGKKRKL
EDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMASQDESLAKLTKEKKALQEAH
QQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQ
ESIMDLENDKQQSDEKIKKKEFETSQLLSKIEDEQSLGAQLQKKIKELQARVEELEEEIE
AERAARAKVEKQRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTL
QHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKSKG
NLEKMCRTVEDQLSELKAKNDENVRQLNDINAQRARLQTENGEFSRQLEEKDALVSQLTR
GKQAYTQQIEELKRHVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSK
ANSEVAQWRTKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQG
EVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYEEGQAELEGAQKEARSLSTELFK
MKNSYEEALDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEKSKKTVETEKTEIQSA
LEEAEGTLEHEEAKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRVIDSMQSTLDS
EVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAAESQKQLRNVQGQLKDAQLHLDDAVRG
QEDMKEQVAMVERRNGLMIAEIEELRAALEQTERGRKVAEQELVDASERVGLLHSQNTSL
LNTKKKMESDLVQVQGEVDDAIQESRNAEDKAKKAITDAAMMAEELKKEQDTSAHLERMK
KNLEVTVKDLTHRLDEAENLAMKGGKKQLQKLESRVRELETEVEAEQRRGVDAVKGVRKY
ERRVKELTYQTEEDKKNVHRLQDLVDKLQLKVKAYKRQAEEAEEQANTHLSRYRKVQHEM
EEAQERADIAESQVNKLRAKGRDHGKAEHAE
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacgcggagatggagtgctacggcccggcggccatctacctccggaagcca
gagagggaaaggattgaggctcaagccgctttttttgatgccaaaacttccttctttgtg
gtgcataagacagaaatgtatctcaagggtacacttgtgaagagagagggtggcaaagtc
acaattgagactgaggatgataaacaggaacttactgtaaaagaagatgaaatctttccc
aggaaccctccaaagtatgataaaattgaggacatggtcatgatgacccacctcaacgag
cctactgtgttgtataacctcaaagagcgtttttcatcctggatgatctacacctattct
gggctgttttgtgttgttgtgaatccctacaagtggcttcctgtctatgatgctatagtt
gtcggaggatacagaggcaagaagaggattgaggcaccacctcacatcttctccatctct
gataatgcctatcagttcatgcacacagatcgtgaaaaccagtctatcttgatcactgga
gaatccggtgcaggaaagactgtcaacaccaaacgtgtcatccagtactttgcaacaatt
gcagctattggagccaagaaggctgagccagttcctggaaagatgcaggtcaattggttg
tttaaaattgtttgtcagaggaaagttaatggctcccttgaggaccaaattgttgcagcc
aaccctctgctggagtcctatggtaatgccaagactgtgaggaatgacaactcctctcgt
tttggtaaattcatcagaatccactttggctcttctgggaagctggcttcagctgatatt
gaaacttatctgctggagaagtcccgtgtaaccttccagttgtctgctgaaaggagctat
cacatcttctatcagctgatgactggtcaccaacctcagctcctggaggctcttctgatc
accactaacccctatgactacccaatggtcagtcagggtgaaatcactgttaagagcatt
gatgatgtggaggagttcattgcaacagatactgctattgacattttgggcttcactggt
gaggagaagcagggcatctacaagctgactggtgctgtgatgcatcatggcaacatgaaa
ttcaagcagaagcagcgtgaggagcaggctgaacccgatggcaatgaggtggctgataaa
atcgcctacctcctgggcctgaactcagcggatatgttgaaagctctgtgctacccaaga
gtcaaggtcggaaatgagatggtaaccaaaggtcagactgttccacaggtcaacaatgct
gtcagtgctctgtgcaagtctatctatgagaaaatgttcttgtggatggtcatccgtatc
aatgagatgctggacacaaagcagccaagacagtacttcattggagtgttggatattgcg
ggatttgagatctttgatttcaacagcctggagcaactctgcatcaacttcaccaatgag
aaactgcaacagttcttcaaccaccacatgtttgtcctggagcaagaggagtacaagaaa
gaaggcattgtctgggagttcattgactttggtatggacttggctgcctgcattgagctt
attgagaagccaatgggcatcttctccatccttgaagaggagtgcatgttccccaaggcc
tctgacacttctttcaagaacaagttgcatgatcagcatcttggcaagaccaaggccttt
gagaagccaaagcctaaaaagggtgtgcctgaggctcacttctccctgattcactatgct
ggtacagttgactacaatatccaaggctggttggacaagaacaaggaccccctgaatgac
tcagttatccagctctaccagaaggcctccaacaaacttctgtgcttcctgtatgcaaaa
catggtgcagaagagccttctggtggtggcaaaaaggctggaaagaagaagggtggttcc
ttccagactgtgtctgctcttttcagggagaacttgggcaagctgatgaccaacttgagg
agcactcaccctcattttgtccgttgcctcattcctaatgaatcaaagaccccaggactt
atggagaacttcttggtcatccatcagctgaggtgtaacggtgtgctggaaggcatcaga
atctgcagaaagggcttccccagcagaatcctctatggtgacttcaagcaaagatacaaa
gtattgaatgccagcgtcatccctgagggacagttcattgacaacaagaaagctagtgag
aagctgctaggctctattgacgtggatcacactcaatacatgtttggacacacaaaggtg
ttcttcaaagctggtctgctgggtgctctggaggagatgagagatgaaaaactggctaat
ctggtgaccatgactcaagctctcgccagaggatatgtcatgaggaaagagtttgtaaag
atgatggagaggagggaagctatcttctccgttcagtacaatatccgctcattcatgaat
gtgaaaaactggccatggatgaatctgtacttcaagatcaagcctcttctgaagagtgct
gagactgagaaggagctgtctgcgatgaaggagaactatgggaagatgcagacagacctg
gctgctgctctagccaagaagaaggagctggaggagaagatggtttctctgctgcaggaa
aagaatgacctgcaattgcaagtggctgcggtaattgagaacctctcagatgctgatgaa
aggtgtgaaggcctgattaagagcaagatccaacttgaggccaaactcaaagagacaact
gagagactggaagatgaagaggaaatcaatgctgagctgactggcaagaagaggaagctg
gaggatgaatgctctgagctgaagaaagatattgatgacttggagctcaccttggctaaa
gtggagaaggagaaacatgccacagaaaacaaggtgaaaaacctgacagaggagatggca
tctcaagatgagtctcttgccaagttgaccaaggagaagaaagccctccaagaggctcac
caacaaacactggatgatctccaggcagaggaagacaaagtcaacactctgaccaaggcc
aagactaagctggaacaacaagtggacgatcttgagggatcactggagcaagagaagaag
ctccgtatggaccttgagagagccaagaggaagcttgagggagatttgaaactggcccag
gaatccataatggatctggagaatgacaaacagcaatctgacgagaaaatcaagaagaag
gagtttgagaccagccagttgctcagcaagattgaggatgaacagtctcttggtgctcag
cttcagaagaagatcaaggagctccaggcacgtgttgaggagctggaagaagaaatcgag
gctgaacgggctgctcgggcaaaggtggagaagcagagggctgacctctccagggaactt
gaggagatcagcgagaggcttgaggaagccggtggagcaacagccgctcagattgagatg
aacaagaagcgtgaggccgagttccagaagctgcgccgtgaccttgaagaatcaaccctc
cagcacgaagccaccgcagcggctctccgcaagaagcaggccgacagcgtcgcagagctg
ggagagcagatcgataacctccagcgcgtcaagcagaagctggagaaggagaagagcgag
tacaagatggagattgatgatctctccagcaacatggaggctgtagctaaatccaaaggt
aacttggaaaaaatgtgcagaactgttgaggaccagctgagtgagcttaaggccaaaaat
gatgagaatgtgcgccagctgaatgacattaatgcacagagggcaagactgcagacagag
aatggtgagttttctcgccagcttgaggagaaagatgctcttgtttcccagctgaccaga
ggcaaacaggcttacactcagcagattgaggagttgaagagacacgttgaggaggaagtg
aaggccaagaatgccctggcccatggtgttcaatcagcccgccatgactgtgatctgctc
agagagcagtttgaggaggagcaagaggctaaagctgagctgcaacgaggaatgtccaag
gcaaacagtgaagtggctcagtggagaaccaaatatgagactgatgctatccagcgcact
gaggagctggaagaatccaagaaaaagcttgcccagcgtctgcaggatgctgaggagtcc
attgaggccgtgaactcaaagtgcgcctctctggagaagaccaagcagaggttacagggt
gaggtggaggacctcatgattgatgtagagagagctaattctctggctgccaaccttgac
aagaagcagaggaactttgataaggtccttgcagaatggaaacagaaatacgaggagggc
caggcagagctggaaggagcccagaaggaggctcgctctctcagcactgaactgttcaag
atgaagaactcttatgaggaggctctggatcatctggagaccatgaagagagagaacaag
aacctgcagcaggagatctcagacctgactgaacagattggtgagactggaaagagcatc
catgagctggagaaatccaagaagaccgtggagactgagaaaactgaaattcagtcagca
ctggaggaagcagagggtacactggagcatgaggaagccaagattctccgcgttcagctt
gaacttaaccagatcaaaggtgaagtagacaggaagctggcagaaaaggatgaggagatg
gaacagatcaagaggaacagccagagggtgattgactccatgcagagcactctcgattct
gaggtcaggagcaggaatgatgccctgagagtcaagaagaagatggagggagatctgaat
gagatggagattcagctgagtcacgctaataggcaggctgctgagtcccagaaacaactg
aggaatgtccagggacagctcaaggatgcccaactgcaccttgacgatgctgtcagagga
caggaagacatgaaggagcaggttgccatggtggagcgtagaaatggactgatgattgct
gagattgaggagctcagagccgctcttgagcagacagagaggggacgcaaagtggctgag
caggagttggttgatgccagtgagcgtgttggactgcttcactctcagaacaccagcctg
ttgaacaccaagaagaagatggaatctgaccttgtacaggttcagggtgaagtggacgat
gcaattcaggaatcaagaaatgctgaggacaaagccaaaaaggctatcactgatgctgcc
atgatggctgaggagctaaagaaggagcaagacaccagtgctcacctagagaggatgaag
aagaacctggaggtcacagtcaaggacctcacgcaccgtctggatgaggctgagaacctg
gccatgaagggtggcaagaagcagctccagaaactggagtcaagggttcgtgaactggaa
actgaggttgaagccgagcagaggcgtggagttgatgctgttaagggagtccgcaaatat
gagaggagagtgaaggagctgacctaccagactgaggaggacaagaagaatgtgcacaga
cttcaggatctggtggataagcttcagctcaaagtgaaggcttacaagagacaggctgag
gaggctgaggagcaggccaatactcacttgtccaggtacaggaaggtccagcatgagatg
gaggaagctcaggagcgtgccgacatcgctgaatcccaggtcaacaagctgagagccaaa
ggccgtgatcacggaaaggctgaacatgctgaataa
DBGET
integrated database retrieval system
