Scomber scombrus (Atlantic mackerel): 133980301
Help
Entry
133980301 CDS
T10651
Symbol
srsf7a
Name
(RefSeq) serine and arginine rich splicing factor 7a isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133980301 (srsf7a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133980301 (srsf7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133980301 (srsf7a)
Spliceosome [BR:
ssco03041
]
Common components
Common spliceosomal components
SR proteins
133980301 (srsf7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
133980301
NCBI-ProteinID:
XP_062274966
LinkDB
All DBs
Position
5:25059662..25068408
Genome browser
AA seq
275 aa
AA seq
DB search
MSYHSSSRSSSRSTDCKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEFE
DPRDAEDAVKGMDGKVLCGSRVRVELSTGMSRKGRGRPSRRQFDPNDRCYQCGDRGHYAY
DCYRFSKRGRRSSRSHSRSRSRSRSRSRGHRYRSRSRSRSQSQSRSRRRSPSYSRRRSRS
GSPARSKSRTPVRSRSRSRSRSGSAPRGRSAPRGRSAPRGRSAPRGRSVSRSRSRSQSAN
HKRNSVWWELSTALTLQLIPGPGSASWRCVRPAGG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccattcatcatcccgtagttcatctcggagcactgattgtaaagtgtatgtg
ggtgacctaggcaacggtgctgccaagggggagctggagcgagcgttcagttactacggc
ccactgaggagcgtctgggtggccaggaacccacctgggtttgccttcgtggagtttgag
gatcccagagatgcagaagatgcagtgaaaggcatggatggaaaggtgctgtgtggttcc
cgtgtccgtgtggagctgtcaacaggaatgtccaggaagggccgcgggcgccccagtcgg
cgccagttcgaccccaatgatcggtgttaccagtgtggggaccggggacactacgcctac
gactgctaccgcttcagcaagaggggccgccgcagcagcaggtctcactctcgttctcgg
tctcgctcaaggtccagatcccgtgggcaccgctaccgctctcgctcccgcagccgtagc
caaagccaaagccggagccgtcgtcgatctccatcctattccaggcgcaggagcaggtct
ggctccccagcccgttccaagtccaggactcctgtgagaagtcgctccagatctcggtct
cgatctgggtctgctcccaggggacgctctgctcccaggggacgctctgcacccagggga
cgctctgcacccaggggacgctctgtgtctcggtcccgctcacgatctcagtcggcgaat
cacaagaggaacagcgtgtggtgggagctgagcactgcactgacactgcagctgatccca
ggcccagggtctgccagctggcggtgtgtacgtcctgcgggagggtga
DBGET
integrated database retrieval system
