Scomber scombrus (Atlantic mackerel): 133980329
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Entry
133980329 CDS
T10651
Symbol
sbds
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133980329 (sbds)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133980329 (sbds)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
133980329 (sbds)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
2-Hacid_dh_C
Myb_DNA-bind_3
DUF3801
PriA_C
Motif
Other DBs
NCBI-GeneID:
133980329
NCBI-ProteinID:
XP_062275012
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All DBs
Position
5:complement(23432557..23436065)
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AA seq
249 aa
AA seq
DB search
MSIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVMQTHTVFVNV
SKGQVAKKDDLTKAFETDDLTEICKQILAKGELQVSDKERQTQLETNFRDIATIVADKCV
NPETKRPYTVNLIERAMKDIHYSVKANKSTKQQALEVIRQLKETMEIQRAHMRLRLVLPA
KEGKRVKEKLKPLMQVVESEDFDEELEMVCLVDPGCYREIDELIRCETKGRGSLEVLNLK
DVEEGDEKL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtctatattcacgccaacaaatcaaatacggctcactaatgtggccgtggtgaggatg
aagaaaggagggaagcgctttgaaatcgcctgctacaagaataaagttatgagctggaga
tcaggagcagagaaagatctggatgaagtgatgcagacacacacagttttcgtaaatgtg
tccaaaggtcaggtggctaagaaggatgacttgaccaaagcttttgagacagatgatctg
acagaaatctgcaaacagatcttggccaaaggagagctccaggtgtcagacaaggaaagg
cagactcagctagagacgaatttcagggacattgcgactatcgtggcagacaagtgtgtc
aacccagagaccaagaggccgtatacagtcaacctcatcgagcgggcgatgaaggacatc
cactactctgtcaaggccaacaagagcaccaagcagcaggctctggaagtgatccggcag
ctgaaagagaccatggagatccagagagcccacatgagactgcggttggtgctgccagcc
aaggagggcaagagggtgaaggagaaactgaaaccgctcatgcaggtcgtggagagtgag
gactttgatgaggagctggaaatggtgtgtctggtggatcctggctgctacagggagatt
gatgagctgatccgctgcgagaccaaaggccgaggctccctggaagttctgaatctgaag
gatgtggaggagggagatgagaagctatag
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integrated database retrieval system
