Scomber scombrus (Atlantic mackerel): 133980331
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Entry
133980331 CDS
T10651
Symbol
zmp:0000000529
Name
(RefSeq) WD repeat-containing protein 20
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133980331 (zmp:0000000529)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
133980331 (zmp:0000000529)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_EML
WDR55
Tricorn_2nd
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
133980331
NCBI-ProteinID:
XP_062275014
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All DBs
Position
5:complement(24662542..24676049)
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AA seq
683 aa
AA seq
DB search
MAGDGGALKDINEIKSQFRTREGFYKLLTLSDSQQRGGLPRGPSAGATLGPGAGTGPIPG
GGVGLLQGPGAAAAAAAAAAAAASSSSSNAAANSSPAGFLPPVRVSMVKLQPEDPGEESE
RVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHDFNQYSATAESVALIVGFS
AGQVQYLDPIKKETSKLFNEERLIDKSKVTCLKWLPKSENLFLASHASGHLYLYNVDHPC
GTTAPQYSLLRQGEGFAVYACKTKTPRNPLLRWAVGEGGLNEFAFSPDGVHVACVGQDGC
LRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGH
KSWVNVVAFDPFTTSLEDEEPMELSGSEEDLHQGATNNSMHFGRVRTSSTLSRLSRHSSK
GGGSAAVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRAFTNTFGPSLSNSGSGVVNSTS
GGGAVEGHHHPPNTNTGTTNPPTLPLPLPRSLSRSNSLPHPAVANASKGQGASEGGGGGG
GGGGSSGGGNSTPFSIGRFATLSLQERKSDKSGGSGGVEKEHKRYHSLGNISKSNDKINV
APRSNRLDAAKVLGTTLCPRMHEVPLLEPLVCKKIAHERLTVLVFMDDCIITACQEGLIC
TWARPGKANLTAQNGNSPSGTVV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccggagatggcggtgctctgaaggatatcaatgagattaaatcccagttccggacc
agagagggcttctacaagctgctcaccctctcggactcgcagcagcggggcgggctgccg
cggggtccgtccgccggagccacgctgggccccggggctggaaccggtccgatacccggt
ggaggggtcgggctgctgcaggggcccggggctgctgccgccgccgctgctgctgctgcc
gccgccgcctcctcctcctcctccaatgccgcagccaactcctctccggcgggcttcctg
ccgccggtccgggtctccatggtcaagctgcagcccgaagacccgggcgaggagtcggag
agggtgtgcttcaacatcggcagggagctgtatttctacacgtacaccaacatcaagaag
gctgtagacctcagtaagccaatagacaagagaatctacaaggggactcagccgacgtgt
cacgacttcaaccagtactctgccacagcggagagtgtagctctcatcgtgggcttctcg
gctggacaggtccagtatctcgaccccatcaagaaggaaaccagtaaactctttaatgag
gagaggttgatagacaaatctaaggtgacgtgtctaaaatggcttccgaagtcggagaac
ctgttcctggcctcccatgcaagcggccacctctacctctacaatgtggaccacccatgt
ggcaccacggccccacagtactctctgctgcgacagggcgaaggctttgccgtttacgcc
tgtaaaactaagacgccgcgcaacccgcttttgcgatgggccgtgggtgagggaggcctc
aacgagtttgctttctccccagatggcgtgcatgtggcgtgtgtgggccaggacggctgc
ctgcgcgtcttccactttgactcgatggagctgcaaggggttatgaagagttactttggc
gggctgctgtgtgtgtcgtggagccccgatgggaagtatctcgccacaggtggagaggat
gacctggttactgtctggtcgtttgcagagagccgcgtggtggcaaggggtcatggtcac
aagtcctgggtcaatgtggtggcgtttgacccctttacgacatccctggaagatgaagag
cccatggagcttagcggcagtgaggaggacctccaccagggggcaacaaataactccatg
cactttggccgggttcgaacaagcagcacgttgtcgcgtctttctcggcacagctctaaa
ggcggcggctcggcggcggtcacataccggtttggttcagtggggcaggacactcagttc
tgtctgtgggacctgacagatgatgtgctgtacccacgcctgccgctgtcccgcgccttc
actaacacttttggaccctcgctgtccaactctggcagcggagtggtcaacagcacctca
ggtgggggagcggtggaggggcaccatcacccgcccaacactaacaccggcaccaccaac
ccgccaacgctccccttaccccttcctcgctccctgtcgcgctccaactctctgccccac
cccgccgtggccaacgcctccaagggccagggcgcctcggagggcggcgggggaggggga
ggaggtggagggagcagcggaggaggaaacagcaccccgttcagcatcggccgctttgcc
acgctgtcactccaggagcgcaagtcggacaagtctggtggcagcggtggggtggagaag
gagcacaagcgttaccacagcctgggcaacatcagcaagagcaacgataagatcaacgtg
gcgccgcggagcaaccggctggacgcagccaaggtcctgggcaccacgctgtgcccacgc
atgcatgaagtgcccctgctggagcctctagtgtgcaaaaagattgcacacgagaggctg
accgtgttggtgttcatggacgactgcatcatcacagcctgccaagagggtctcatctgt
acctgggcacgaccggggaaggcgaacttgacagcacaaaacggtaactctccgagcggc
acagtggtatag
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