Scomber scombrus (Atlantic mackerel): 133980412
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Entry
133980412 CDS
T10651
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133980412 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133980412 (snrpd2)
03032 DNA replication proteins [BR:
ssco03032
]
133980412 (snrpd2)
Spliceosome [BR:
ssco03041
]
Complex A
U1 snRNP components
Sm proteins
133980412 (snrpd2)
U2 snRNP components
133980412 (snrpd2)
Complex B
U1 snRNP components
133980412 (snrpd2)
U4/U6.U5 tri-snRNP components
133980412 (snrpd2)
Complex C
U2 snRNP components
133980412 (snrpd2)
DNA replication proteins [BR:
ssco03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133980412 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
133980412
NCBI-ProteinID:
XP_062275107
LinkDB
All DBs
Position
5:complement(28068355..28071395)
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AA seq
118 aa
AA seq
DB search
MSLLTKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttaacgaagcccaagtcagagatgaccccagaggaactccagaaacgtgaa
gaggaggaattcaacactggccctctgtctgtcctcacccagtcagtcaagaacaataca
caggtcctcatcaattgtcgcaacaacaagaagctgctcggaagggtcaaggcttttgac
aggcactgcaacatggtgttggagaatgtgaaggagatgtggacagaagttcccaagagc
gggaagggaaagaagaagtctaagccggtgaataaggaccgctacatttctaaaatgttc
ctcaggggagactccgtcatcgtcgtgctgcgaaatcctctgatcactggaaaatga
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