Scomber scombrus (Atlantic mackerel): 133980419
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Entry
133980419 CDS
T10651
Symbol
gfm1
Name
(RefSeq) elongation factor G, mitochondrial
KO
K02355
elongation factor G
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssco03012
]
133980419 (gfm1)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133980419 (gfm1)
Translation factors [BR:
ssco03012
]
Eukaryotic type
Elongation factors
133980419 (gfm1)
Prokaryotic type
133980419 (gfm1)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
133980419 (gfm1)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
133980419 (gfm1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_III
EFG_C
GTP_EFTU_D2
EF-G_D2
RF3_C
MMR_HSR1
AvrPtoB_bdg
SRPRB
AIG1
Motif
Other DBs
NCBI-GeneID:
133980419
NCBI-ProteinID:
XP_062275115
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All DBs
Position
5:15294035..15305654
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AA seq
748 aa
AA seq
DB search
MRVLKAGLCLAKTRLVAPSSVTIKKVLINSCRSCSSGVFPNQRIRNIGISAHIDSGKTTL
TERVLYYTGRIAEIHEVKGKDGVGATMDSMELERQRGITIQSAATYTEYKDHNINIIDTP
GHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRLGAN
PNRALQQMRTKLNQNAAFVNIPIGLEGDIRGLIDLIGERTMYFDGPFGKDIRYDEIPADF
RAEAADRRQELVECVANADEILGEVFLEEKIPTNDDLKAAIRRATVQRLFSPVLVGTALK
NKGVQPLLDAVLEYLPNPTEINNYGILNEEGSSESSKILMDPTRDSANPYVGLAFKLEAG
RFGQLTYVRVYQGCLKKGEYIYNTRTSKKVRVQRLVRLHADQMEDVDEVYAGDICALFGV
DCASGDTFTSKASANLSMESIHVPEPVISMAMKPSNKNDLDKFSKGINRFTREDPTFRVH
YDTESKETIISGMGELHLEIYSQRMEREYGCPCVMGKPKVAFRETITSPVPFDFTHKKQS
GGSGQYGKVIGVLEPLEAEDYTKLEFDDQTMGTNVPKQFVPAIEKGYRDACEKGPLSGHK
ISGVRFLLEDGAHHMVDSNELSFIRAGEGALKQAMEKATAAILEPIMSVEIVAPQEFQGT
VISGVNRRHGVISGQDGAEGYFTLYADIPLNDMFGYATELRSCTEGKGEYTMEYSRYQPC
LPATQEELMHKHLEATGQLPAKKNKWKN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagagtactaaaagcgggattgtgtttggccaaaacgcgtcttgtagctccgagcagc
gtcactatcaaaaaggtgctcatcaacagctgtcggtcatgttcctctggtgtgtttccc
aaccagaggatccgaaacataggcatctcagcgcacatcgactccgggaagacaaccctg
accgagcgcgtcctctattacaccggcaggatagcagagatacacgaggtgaaagggaag
gacggtgttggagccactatggactcaatggagctggagaggcagagaggcatcaccatc
cagtctgctgccacttacaccgagtataaggatcataacatcaatattattgacacccca
ggtcacgtggacttcaccatcgaagtggagcgagcgctgcgtgtgctggatggagccgtg
ctggtgctgtgtgcggtggggggcgtccagtgtcagacgatgaccgttaacagacagatg
aaacgctacaacgtccccttcctcaccttcatcaacaagctggaccgcttgggtgccaac
cccaaccgagccctgcagcagatgagaaccaaactgaaccaaaatgcagccttcgtgaac
atccccatcggcctggagggagacatacgtggcctgattgacctcataggggagcgaacc
atgtattttgatggaccatttggtaaagatatccgctatgatgagatcccagctgatttt
cgtgcagaggctgccgaccggagacaggaactggtggagtgtgtagctaacgctgatgaa
attttgggagaggtgttcttggaggaaaaaattccaaccaacgatgacctgaaggctgca
atccgcagagccacagtacagcgtctcttctccccagtgctggtgggaacagcgctgaag
aacaagggcgtccaacctctactggatgctgtgctggaatacctgccaaaccccacagaa
atcaacaactacggcatcctcaatgaagaaggttccagtgaatcatcaaagattctcatg
gatcccacaagagattctgcaaacccttatgttggtctggccttcaaactggaggcaggg
agattcggtcagctgacgtatgtgcgtgtgtaccagggctgtctgaagaagggggagtac
atctacaacacgcgcacgagcaagaaagtcagagtgcagaggcttgtgcgtctccacgct
gaccagatggaggatgttgatgaggtgtatgcaggagatatttgtgctctgtttggggtt
gactgtgcaagtggagatactttcacatctaaggccagcgctaacctctctatggagtct
attcacgtcccagagcctgtcatttccatggcaatgaagccttccaacaagaatgacctg
gataaattctccaaaggtatcaaccgtttcaccagagaggatccgacgtttagagttcat
tatgacacagagagcaaagaaaccatcatctcaggcatgggcgagctgcatctggaaatc
tactcccagaggatggagagagaatatggctgtccctgtgtgatgggaaagcccaaagtg
gctttcagagagacgatcaccagtcctgtaccgtttgacttcactcataagaagcagagt
ggtggttctgggcagtacggtaaggttattggagtcctcgagccgctggaagcagaagat
tacaccaaattggagtttgatgaccagacaatgggaaccaacgtcccgaagcagtttgta
ccagctatagaaaagggttacagggacgcctgtgagaaaggacccctgagcggccacaaa
atctcaggagtcagattcctcctggaggacggagcacatcacatggtggactccaatgag
ctctccttcatccgtgcaggagagggcgctctaaagcaagctatggaaaaagccaccgcg
gccatcctggagcccatcatgtctgtggaaattgttgcacctcaggagtttcagggaaca
gttatttctggagtaaaccgtcgccatggtgtcatttcaggacaggatggggctgaagga
tacttcactctgtatgctgatattccactaaacgacatgttcggctacgccacagagcta
cgctcctgcactgaaggaaaaggcgagtacaccatggagtacagcagataccagccctgc
ctaccagccacacaagaagaactcatgcacaaacacttagaggctacaggccagcttccc
gcaaagaagaacaagtggaagaactga
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