Scomber scombrus (Atlantic mackerel): 133980421
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Entry
133980421 CDS
T10651
Name
(RefSeq) claudin-8-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133980421
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133980421
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133980421
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133980421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133980421
04147 Exosome [BR:
ssco04147
]
133980421
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133980421
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133980421
Exosomal proteins of colorectal cancer cells
133980421
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
133980421
NCBI-ProteinID:
XP_062275118
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Position
5:20831052..20832203
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AA seq
253 aa
AA seq
DB search
MANSALEIVGLLLTVIGLIGAAASTGMPMWRVTAFIGENIIVFETRYEGLWMNCYRQADI
RMQCKVYDSLLALSPDLQAARGLMCAAVALSGLGLLISLVGLQCTSCIDNSNDRSKRMVL
IIAGSMILMSCICVLIPVSWTGHVIITDFYNPLLIDAQRRELGEALYIGWVAAAFLFAGG
CMFTCCNIQSDDKSSQRYVYSRNTDYVAYPPQPLQPQQLMFLPQPQPVLSRHPSSNYSYH
SRHPSVRSGVAYL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccaactcagcgctggagatagtgggtcttttattgactgtgattgggctgattggg
gcagcagcgagcactgggatgccaatgtggcgagtcacagccttcattggggagaacatc
attgtgtttgagacccgttacgagggtttatggatgaattgctacaggcaggctgacatc
aggatgcagtgcaaggtgtatgactctctcctggccctgtcccctgacctacaggcggca
cgaggactcatgtgcgctgctgtggcgctgagtggccttggcctactgatcagtttggtg
gggctgcagtgcacatcttgcattgacaatagcaatgatcgatctaaacggatggtcctc
atcattgcaggaagcatgattctaatgtcttgcatctgtgtcctcatccctgtgtcctgg
actggtcacgtcatcatcacagacttctacaaccccttgctgattgacgcacagcgcaga
gagctcggagaggccctttacatcggctgggtggctgctgctttcttgttcgctggggga
tgcatgtttacttgttgtaatattcagtccgatgacaaaagttcacaacggtatgtgtac
tccaggaacactgactacgtagcctatcctccacagcctctgcagcctcaacagctgatg
tttcttccccaaccccagccagtgctatcgagacatccatccagcaactacagctaccac
tccagacacccctctgtacgcagtggtgtggcttatctctga
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integrated database retrieval system
