Scomber scombrus (Atlantic mackerel): 133980430
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Entry
133980430 CDS
T10651
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133980430 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssco01001
]
133980430 (limk1a)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133980430 (limk1a)
Protein kinases [BR:
ssco01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
133980430 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
RelB-like
PDZ_6
PDZ_2
ABC1
RIO1
B2
PDZ_4
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
133980430
NCBI-ProteinID:
XP_062275127
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All DBs
Position
5:complement(12597411..12648290)
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AA seq
677 aa
AA seq
DB search
MRLMLLCCTWKDERMGEEEAGGSLPVCAGCKQRIYDEQYLQALNADWHTVCFRCCECRAS
LSHWYYEKEGRLFCKKDYWAKFGELCHGCNDPITTGLIMVAGEQKYHPECFTCLNCRAFI
GDGDTYALVERSKLYCGQCYYQTIVTPVSLPDSPCSPCSRIPHTVTLVSIPASAEGNNGH
RGRGFSVAIDQPLSPINGYSPEHGPTVRVSQVDEDCISPDVKNSIHVGDRILEINGTPIH
NVPLDEIDLLIQETSRLLQLTIEHDPHSQGQEGGSSGAEEQVDGPMSSPLSGGPSPILPI
TQPPNHDINSLRSRIITRSYSIDKSPGSSNAASPISQRKDINRSESLRVVSNRTHRIFRP
SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDDETQRTFLKEVKVMRCLDHPNV
LKFIGVLYKDKRLNFIAEYIKGGTLREIIKKMDSNYPWNQRVSFANDIAAGMSYLHSMNI
IHRDLNSHNCLVREDNTVVVADFGLARLMVDDKHEEKLPQGKLSGLKKPDRRKRYTVVGN
PYWMAPEMIHGKSYDERVDIFSFGIMLCEIIGRVNADPDYLPRAMDFGLNVSGFLEHYYP
PDCPPAFFPIAAVCCDLDADKRPAFTKLEEWLENLKMHLDIGLPMVSEVSQLQKTFWENH
SIMHSENGLHVHPEQPE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgctgcacctggaaggacgaacgtatgggagaggaggaagct
ggaggaagcttgcccgtctgtgcgggatgcaaacagaggatctacgatgagcagtacctc
caggccctcaacgctgactggcacaccgtctgcttcaggtgttgtgagtgcagggcctcg
ctgtcccactggtattatgaaaaagagggacggctcttctgcaagaaggactactgggcc
aaattcggggagctgtgccatggctgcaacgatccgatcaccaccggccttatcatggtc
gcaggggaacagaaatatcacccagaatgcttcacctgcctgaactgcagggcgttcatc
ggtgatggagacacatacgctctggtggagagatccaaactctactgtggtcaatgttac
taccagaccattgtcaccccggtgtcgttgccggactcgccatgctcaccatgctcgcgt
atccctcacacggtcacgctggtgtcaatccccgcctccgccgagggaaacaacggacac
agaggtcggggtttctctgtggccatcgaccagccactcagcccgatcaacggctacagc
cccgaacatggacccactgtcagagtctcccaagtggacgaagactgcatcagtccagat
gtgaaaaattccatccatgttggagacaggatcctggaaatcaacgggactccaattcat
aacgtccctctggatgagatcgacttgctgattcaggagacgagtcggctgctccaactc
accatcgagcatgaccctcacagtcaggggcaggagggaggctcctcaggggccgaagag
caggtggacggccctatgtcctcccctctgtctgggggccccagccccatcctgcccatc
acccagcccccaaaccacgacatcaacagcctgaggtcccgtatcatcacgcggagctac
agcattgataagtcaccaggctccagcaacgcagcgtcacccatctcacagaggaaggac
attaatcgctccgagtcactccgcgttgtctcaaatcggacgcaccgcatcttccgcccg
tctgatctaatccacggagaggtgctggggaagggctgcttcggacaagccatcaaggtg
acccatagggagacaggggaggtgatggtgatgaaggagttgattcgctttgatgatgag
acgcagagaacattcctgaaagaggtgaaggtgatgcgttgcctggatcaccccaacgtg
ctcaagttcattggagtcctctacaaggacaaaagactcaacttcatcgcagagtacatc
aagggtggcaccttgagggagatcatcaagaaaatggacagcaactatccctggaaccag
agggtcagttttgccaacgacatagctgctgggatgtcgtacctgcattccatgaacata
atccaccgggacctgaactcacacaactgtttagtccgagaggacaacacagtggtggtg
gcagactttgggctggctcggctcatggttgatgacaaacatgaggagaagttgccgcag
ggcaaactgtccggcctgaagaagcccgaccgcaggaagaggtacaccgtggtgggaaac
ccctactggatggctcctgagatgatccacggcaagagctacgatgagagagtcgacatc
ttttctttcggtatcatgctctgtgagatcattggcagggtgaatgcagacccagactac
ctccccagggcaatggacttcggactgaacgtgtctggcttcctggagcattactatccc
cctgattgtccccctgccttcttccccatagctgctgtgtgctgtgaccttgatgcagac
aaacgccctgctttcaccaaactggaggagtggctggagaacctgaagatgcacttggac
attggtctgccgatggtgtctgaagtgagccagctgcaaaagaccttctgggaaaaccac
agcatcatgcactccgagaacggcctgcacgttcaccccgaacagccggagtag
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