| Entry |
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| Symbol |
tsr1
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| Name |
(RefSeq) pre-rRNA-processing protein TSR1 homolog
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| KO |
| K14799 | pre-rRNA-processing protein TSR1 |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Brite |
Ribosome biogenesis [BR:ssco03009]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133980435 (tsr1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:17816222..17827141
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| AA seq |
842 aa
MAKMAANGEKQQGHRAGIYKQKNKGHKHGKHRTKGEIERENKGRVSVTALTKKQRKEQKR
MDRRHKANQLRKNKKDMVLTEKRRLGSRDGPPHLVAVVALHAGVDAGAITKLLRGEGAGG
VLHQEKCIIGVSDSFGLILPRFKQRFTFLSQSTADIHSLLDMAKIADSLIFVLDSTEGWD
SYGDYCLSCLFAQGLPSHALVCQGVSDLPVKKRVDSRRALSKITEIRFPDTRLFPLDMEQ
DATLLLRHLGAQRQRKLGFRSRRSHLLAQHATFTPNIPAEGTGARPTGLGTLCVSGYVRG
RPLRVDRLVHISGHGDFQLSQIDAPLDPLPLNITTPRTAKPGKGGDIDMQEGDVDEAPVR
VLMKADPSNRESLHTEAEVDPMDGEQTWPTDSELLEAEEARKSKRVMKVPKGTSDYQATW
IVDEGDDEDGDVDDESSEDDDGDDMMDEAMERDDEENNSQDAGSGCSEEEEEEEEEEEEE
EEEEELCSTERAGADQRYDEHIDEAAEEEGLKRYREARSNEMFPDEVDTPRDIAARIRFQ
RYRGLKSFRSSPWDPMENLPLNYSRIFQFQSFERTRRRILAEAAEEEEGAMVGWYVTLHI
TDVPFSVMESVQSGRPLVLVSLLPNEQKMSVMHLLVRRHPSNTEPIKSKEELVFHCGFRR
FKASPIFSQHTSADKHKMERFLRPDAPTVVSVYAPITFPPTGVLLFKQRNDDIQDLVATG
SLLSCDPQRVVLKRIVLSGHPFKINRRSAVVRYMFFNRDDIMWFKPVELRTKWGRRGHIK
EALGTHGHMKCVFDNQMRSQDTVMMNLYKRVYPRWTYDPYVPLSLPWVKREITVDMEDLE
ME |
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| NT seq |
2529 nt +upstreamnt +downstreamnt
atggcgaaaatggctgcgaatggggaaaaacaacagggccacagagccggcatatataaa
cagaaaaacaaaggccacaaacatggcaagcatcggacgaaaggtgaaatcgagagagaa
aacaaagggagagtgtccgtgacagccctcaccaaaaaacagaggaaagagcaaaagagg
atggacagaaggcataaggccaaccagctacgcaagaataagaaagacatggttcttaca
gagaaacggcgtctaggcagcagggatggtcctcctcacttggttgccgtggttgccctc
catgctggagttgatgctggtgccatcaccaaactgctacgtggagagggtgcaggaggt
gtcctacatcaggaaaagtgtatcattggcgtcagcgacagtttcgggctgattctgcct
cgttttaaacagaggttcacctttctaagccaaagcacggcggacatacactccctgctg
gatatggcaaagattgcagatagcctcatatttgtgctggactctactgaaggttgggac
agctatggagactattgtctctcctgtctgttcgcccagggcctccccagccacgctctg
gtgtgtcagggtgtgtctgatcttcctgtgaagaagagggttgattccaggagagctctg
tcaaagatcactgagatccgtttccctgatacccgtctcttccctctggatatggagcag
gatgccactctacttctcagacacctgggcgctcagagacagaggaagctgggtttccgc
tccagacgctcccatcttttggctcagcatgccacttttacccccaacatccctgctgag
gggacaggtgccagacccaccggcctgggtaccctttgtgtctctgggtatgtccgtggc
cgtcctctacgagttgacagactggtgcacatcagtggacacggagactttcagctcagt
cagattgacgctccgttagaccctcttccacttaacataacaacacccagaacagcaaag
ccaggcaagggaggagacattgacatgcaggaaggtgatgtagatgaggctccagtgcga
gtgcttatgaaggcggacccatccaacagggaaagcctgcatacagaggctgaggtggac
cccatggatggagagcagacgtggcccacagactcagaactgctggaggctgaagaggcc
agaaagagcaaacgtgtgatgaaggtccctaaagggacatcagactaccaggctacatgg
atcgtggatgaaggtgacgatgaggatggtgatgtggatgatgaaagcagtgaagacgat
gatggtgacgacatgatggacgaggccatggagagagatgatgaggagaataactcgcag
gatgctggttcgggctgttccgaagaggaggaggaggaggaagaagaagaagaggaggag
gaagaagaagaagagttgtgctccacagagcgagctggagccgatcagcgctacgatgag
cacatagatgaagctgcagaggaagagggtctcaaacgttaccgtgaggcccgatccaat
gaaatgttccctgatgaggtggacacacctcgcgacatagcagctagaatcaggtttcag
cgttacagaggattaaaaagtttccgttcctctccctgggatccgatggagaacttgcct
ctcaactactcacgcatcttccagtttcagagctttgaacgtacccgccgccgcatactg
gctgaagctgcagaggaggaagagggagccatggtgggctggtatgttacactgcacatc
actgatgtgcccttttctgtgatggagagtgtccagtctggccgtcctctggtattagtg
tccctgttgcccaatgaacagaagatgtcagtgatgcaccttttggtgagaagacacccc
agcaatacagagccaatcaaatctaaggaggagctggtgttccactgtggatttcggagg
ttcaaggcctctcctatcttctcccagcacacctcagctgacaagcataaaatggagcgc
ttcctcaggccagatgcccccactgtggtatcggtgtacgctccaatcaccttcccccca
acaggagtcctgctcttcaaacaaaggaacgatgacatccaggacctggttgctacaggc
agtctgctcagttgtgaccctcagcgtgttgtcctgaagaggattgtactgagcggacac
ccgttcaaaattaaccgccgctctgcagttgttcgttacatgttctttaacagggatgat
atcatgtggttcaagccagtggagctgcgaaccaagtggggtcggagaggccacatcaag
gaggctttaggaacgcatggtcacatgaagtgtgtgtttgataatcagatgcgatctcaa
gacactgtcatgatgaatttgtacaagagagtttatcctcgctggacatatgacccctat
gtgcccttgtcattaccctgggttaaaagagagattactgtggacatggaggacttggag
atggaataa |
|---|
