Scomber scombrus (Atlantic mackerel): 133980448
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Entry
133980448 CDS
T10651
Symbol
si:ch211-167j9.5
Name
(RefSeq) tyrosine kinase receptor Cad96Ca
KO
K05093
fibroblast growth factor receptor 2 [EC:
2.7.10.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04020
Calcium signaling pathway
ssco04144
Endocytosis
ssco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133980448 (si:ch211-167j9.5)
04020 Calcium signaling pathway
133980448 (si:ch211-167j9.5)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133980448 (si:ch211-167j9.5)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133980448 (si:ch211-167j9.5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssco01001
]
133980448 (si:ch211-167j9.5)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssco04090
]
133980448 (si:ch211-167j9.5)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133980448 (si:ch211-167j9.5)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
133980448 (si:ch211-167j9.5)
Protein kinases [BR:
ssco01001
]
Receptor tyrosine kinases (RTK)
FGFR family [OT]
133980448 (si:ch211-167j9.5)
CD molecules [BR:
ssco04090
]
Proteins
133980448 (si:ch211-167j9.5)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Growth factors/receptors
133980448 (si:ch211-167j9.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Kinase-like
TMEM132_C
ABC1
Motif
Other DBs
NCBI-GeneID:
133980448
NCBI-ProteinID:
XP_062275156
LinkDB
All DBs
Position
5:3148454..3155510
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AA seq
436 aa
AA seq
DB search
MMAYYNCTSIQGPSDWLLNWQDYVLIGALCFTILVLTLVGVVCLRKYRSMTLTIRRLQGS
KLFMSAIPRLEASIMPQRMVPVVEEPEDEETPALAPLHQSSTVRLPSRRLWKGLHQGPRF
TKSDLNLLQLIKAGKEGVFYQARMAKGTCKGHSLFTCKISKDGVRPKHVDTEISIMRKLV
HHKNILQLLDWNTTEEPYILLMEYVSCGTLRTFLQTNRVHLSADTELQSLLTIASYHIAL
AMQHLRSKMIVHCDLALRNIMINQFPWEVKVAEFGLARDLTRMTSRRSTRWRTPQQRVPL
RWYPPEYFKNNYYSFKGDVWSFGIVLWEMQTFGTLPYPNLETSEAVVYHICIGHKNTNPE
GCRPEILHIMKDCWLEPYTMRPSFTDIVHMLENIIEDDADYVDVASPQMLVKDESDYNET
QCLRASSITMEDRSKI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttattataactgtacatctatccaaggtccttcagactggctcctaaactgg
caggactacgtcctcatcggggccctctgcttcaccatcctggtgctcacactggtgggg
gtggtgtgtctcagaaagtatcgctctatgacccttaccattcgaaggctgcaggggagc
aaactgtttatgagtgctattccccggctagaagcctccatcatgcctcagaggatggtc
cccgtggtggaggagccggaggatgaggagactcctgccctggctcccctgcatcagagc
agcacagtcaggttgccctccaggaggctgtggaaaggcctgcaccagggtcctcgtttc
accaagtcagacctgaacctgcttcagctgatcaaagcggggaaggagggcgtcttctac
caggccaggatggctaaagggacgtgtaaaggccacagcttgttcacctgcaagatcagc
aaagatggtgtccgcccaaagcatgtggacacagagatttccatcatgaggaaactggtg
catcacaaaaacatcctgcagttactggactggaacacaactgaggagccttacattctc
ctcatggagtatgtgagctgcggcactctgaggaccttcctgcaaaccaacagagtccac
ctgagtgcagacactgagctgcagagcctcctcaccatcgcctcctatcacatcgctctg
gccatgcagcacctgcgctccaaaatgattgtgcactgtgacttggctctgaggaacatc
atgatcaatcaatttccctgggaggtgaaagtggcggagttcggcctggcccgagactta
acgcgcatgacgagccgccgcagcacccgatggagaaccccacagcaacgtgtgccgctg
cgatggtaccctcctgagtacttcaagaacaactattacagcttcaagggggacgtttgg
tcatttggcattgtgctgtgggagatgcagacgtttggtacgttaccatacccaaacctg
gagacatcagaggcagtggtgtaccacatctgtatcggccataagaacacaaaccctgaa
ggctgcagaccagagatacttcacatcatgaaagactgctggctggagccgtacactatg
agaccctcattcacagacatcgtccacatgttggagaacatcatagaggatgatgcggat
tatgtggatgttgcgagtccacagatgttggtgaaagacgagtctgattacaatgaaact
cagtgtctgcgggcatccagcatcaccatggaagacagatctaaaatctaa
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