Scomber scombrus (Atlantic mackerel): 133980511
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Entry
133980511 CDS
T10651
Symbol
laynb
Name
(RefSeq) chondrolectin
KO
K10077
layilin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133980511 (laynb)
04091 Lectins [BR:
ssco04091
]
133980511 (laynb)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Hyaluronan
Cell surface receptors
133980511 (laynb)
Lectins [BR:
ssco04091
]
C-Type lectins
Others
133980511 (laynb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
SIT
TMEM154
Motif
Other DBs
NCBI-GeneID:
133980511
NCBI-ProteinID:
XP_062275246
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Position
5:13682545..13687511
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AA seq
368 aa
AA seq
DB search
MDFMKLFGTVIAVLFHPGSASKINGQRICRRGTERPCYKVSYIQDIRRRVTFEDARQACR
LDGGELLSIETESEQRLIERFIQQLQSGDGDFWIGLRRSPKSFRAGTTSPGCPSQYYWLD
GSKAKFRNWHWDEPSCGGEMCAVLYHQPLAPPDEEGHFLFQWNDDNCNSKNNYVCKYPEE
NVPAFTEEGNTAHAVPTLRPNFFSTTESDERIKIRLPESSVSLPDDTLYVSYILYAAIPA
VLLLLFAAAGFFCYKQHAKRRKTETESYPGRPKPWMSTAASPCPVQGPYAFSDITKLPHT
ALDNSMEENIMTKYSCSPSQDSQCDDYENVSCTDRESGFVTNDIYETCRTQSRRCRSQTG
WVENEIYG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatgaagctgtttggcactgttatcgccgttttgttccaccctggatccgct
tctaaaataaatggccagaggatctgtcggcgtgggacagagcgcccttgctacaaggtg
tcctacatccaggacatcaggcggagggtgacctttgaggatgccaggcaggcctgcagg
ttggatggaggcgagttgctcagcatcgaaacagaaagcgagcagcgactgatagagagg
ttcatacaacagctgcagtctggagatggagacttctggatcgggctccgccgcagccca
aagagcttcagggcagggaccaccagcccaggttgcccctctcagtactattggctggat
ggaagcaaggccaagttcagaaactggcattgggatgagccgtcatgtggtggggaaatg
tgtgcggttctgtatcaccagcccttggcaccacctgacgaagaaggtcatttcctcttc
cagtggaatgacgacaactgcaactccaagaacaactacgtctgcaaatacccagaagaa
aatgtaccagcatttactgaggaagggaacacagcacatgcagttccaactctgaggcca
aactttttctcaactacagaaagtgacgagaggataaaaataaggctacctgaatcatca
gtgtctctcccagacgacaccctgtatgtttcctacatcctttatgcagctattcctgct
gtactgcttctactgtttgcagctgctggcttcttctgctacaaacagcatgctaaaagg
aggaagacagaaacggaaagttatcctggcagacccaaaccctggatgtcaacagcagct
tcaccttgccccgtacaaggaccttacgcctttagtgacattaccaaactgcctcacact
gctctggacaacagcatggaagaaaacatcatgacaaagtactcatgctctccttcccag
gactcccagtgtgacgattatgagaatgtgtcatgcacggacagggagagcggctttgtg
accaatgacatttatgagacctgcagaactcagagccgacgctgccgcagtcagactggt
tgggtggaaaatgagatctatggataa
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