Scomber scombrus (Atlantic mackerel): 133980565
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Entry
133980565 CDS
T10651
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
133980565
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133980565
NCBI-ProteinID:
XP_062275308
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Position
5:11118750..11129774
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AA seq
1022 aa
AA seq
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MAQVYCWGDSSSGQFGPQSALSPVSWSVRSVITGVCCGERHTLFLTRDGEVLSCGHNSQG
QLGRQSDKDERTPGLVQGLGEVVMVACGQDHSLVVCASGCMYSWGQEENGQLGMSPNQMH
NSHRPSQVPLPMAVPVIQVACGNSHSLALTRGGDVFSWGLNSHGQLGLGKEVSVQHTPVL
VCALSGVAVKQISAGATHTLFLTLSGLVYCCGANKEGQLGLNRVDEKGRFNVCMVPALRS
LGVTFISCGEAHSAVLTKEGKVFTFGEGTHGQLGHNSAVNEVRPRLVDGLDGPASQVACG
RRHTLVLGSSGQLWAFGSGVKGQIGTGLSGGSLSPTLVQLPWITDSAAAVPSGLTISAGW
NTNFAYPSATQSLERHQLTGRLDETKLKKWLSMKEGNAEAKREIASMFLTSSSLVASFTK
ADGLSSEAGDLTVDLEAVSRTFDQLLAIPWIKKSVNLALLMDLLVASMHQLKSPEIILIL
LTCPLLQEDSNAMTGALPLAIVIEKMSEKTQKTLRSFWSSLTPSILMKHILVFKNALGFM
LRNGLLVTHNPGVKFLLEALKLLYKANKAGKSYKVPLSTFYVEELSGSVQPVEDVALWLA
FSKVEDDDNTPAIFCRYPFLFNLVCKVAVFNIFAHIMKKAELFEFVQEQAFVRSDQLLAK
PPPSAPAPVFQLTLRRTHLVDDTFRQLSAADHCAFKRELLVIFSDDRKVSNVNKKDFFLH
LFNNLMDPKSDMFIYNESKTLAWFPARPKVEVKHYFLFGVLCGLALYNYNIIHLGFPLVL
FKKLCSVKPSLDDLKEFDPVVGESMRCILEDYTPDVLAEMETPFTVHWTGEEVELDPKEP
GKLVTDSNKKEFVAAFVNYAFNKSVERVFEEFKRGFFKVCDMDVVDFFQPEELQAVMVGQ
ENYDWEVFKQNTVYEGEYHAAHSNILTFWEVFEKLTAEEKKKFLLFLTGSDRVPFLGMES
IKMRVAALPDSSEIHFPESLTCHCLLLLPIYKRYPVERTMHERLLHAIHHNRGFSKKRDI
TG
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtgtactgctggggggacagctccagtggacagtttggacctcagtctgct
ctcagtcccgtgtcctggtcagtccgatctgtcatcacaggcgtctgctgcggggagaga
cacactttattcctcaccagggatggggaagttttatcctgtgggcacaactcacaggga
caacttggaagacagagtgataaagatgaaaggacaccaggtcttgtgcagggactgggt
gaggtggtgatggtggcttgtggtcaggaccactctctggttgtatgtgcatctggatgc
atgtactcctggggacaggaagaaaatggccagctagggatgtcaccgaatcaaatgcac
aacagtcacagaccaagtcaggtgcctttgcctatggcagtaccagtgattcaggttgca
tgtggaaactcccactccttggctttgactagaggaggagatgtcttctcgtggggttta
aacagtcacggccagctgggtctagggaaggaggtgtcagtgcagcacactcctgtcctg
gtgtgcgctctgagcggcgtagcagtaaagcagatatcagctggagcgacccacactctg
ttcctcacactctcaggcctggtgtactgctgcggggccaataaagagggccaacttggt
ctcaacagggttgatgagaagggtagattcaacgtctgcatggtacctgctctcagatct
ctgggtgtcaccttcataagttgtggagaggctcactctgccgtgttaacaaaggagggc
aaggttttcacttttggagagggaacccacggtcagcttggtcacaactctgctgttaat
gaagtgagacccagactagttgatggtttggatggacccgcctcacaggttgcatgtggc
aggcgtcacactctggttttaggctcctcaggccagctgtgggcttttggcagtggggtt
aaaggtcaaattgggactggactttcagggggcagtctgagtcccactcttgtacaactt
ccatggatcactgacagtgcagcagccgttccctcaggcttgacaatatctgctgggtgg
aatacgaatttcgcttacccctcagcaactcagagcttggagcgacatcagctaactggg
cggcttgatgagacaaagctgaaaaaatggctgtcaatgaaagaaggcaacgcagaggca
aagagagaaatcgcctcaatgtttctcacaagttcaagtcttgttgcaagttttacaaaa
gcagatgggctctcatcagaagcaggtgacttaactgtggaccttgaagctgtgagccga
actttcgaccagctcctggcaataccatggatcaaaaaatcagtgaacctcgccctcctg
atggacttgcttgttgcttcgatgcatcagctaaaatcaccagaaatcatcctgattctg
ctgacgtgcccccttcttcaagaggactctaacgccatgacaggggcgttgcctttggct
atcgtcatagaaaaaatgagcgagaagactcagaaaacattaagaagcttttggtcttcc
ctgacaccctccatattgatgaagcacatcttagtgttcaaaaatgccctcggctttatg
ctaagaaatggcctcttggtgactcacaacccaggagtcaaattcctgctggaagccctc
aagctactctacaaagcaaacaaagctggaaagtcctacaaagtcccactgagcaccttt
tacgtagaggagttgagtggaagtgtgcagccagtggaggacgtagctctttggcttgcg
ttttctaaagtggaggacgacgacaacacacccgccatcttctgtcgctacccgttcctg
ttcaatctggtttgcaaggtggcggtctttaacatctttgcacacataatgaagaaagcg
gagcttttcgagttcgttcaggaacaggcttttgtgaggtctgaccaattgttggcaaaa
cctccaccctctgctccggcccctgtcttccagctgactctgagacgaactcacctggtg
gacgacacattcagacagctcagtgcagcagatcattgcgccttcaaaagggagcttttg
gtcatattttcagatgacaggaaggtgtcgaatgtcaacaaaaaggacttcttcctccac
ctgtttaacaacctgatggatcccaagtctgacatgttcatctacaacgagagcaagact
ctggcctggttccctgccaggccaaaagttgaggtgaagcattatttcctgtttggagtc
ctgtgtggtctggctctctacaactacaacatcatccacctgggcttcccgctggttctc
ttcaagaagctgtgcagtgtcaaaccttcactggatgacctgaaggagtttgatcctgta
gtgggagagagtatgcgctgcatattagaggactacactcctgatgtacttgccgagatg
gagactcctttcactgtgcattggaccggtgaagaagttgagcttgatccaaaagaacct
ggaaaactggtcacagattcaaacaagaaagagtttgtagcggcctttgtcaactatgcc
ttcaacaaatcggtggagcgagtgttcgaagagttcaagagagggttcttcaaggtgtgc
gacatggacgtggtagatttcttccagccagaggagctgcaagcagtgatggtgggacaa
gaaaactacgactgggaagtgttcaaacagaacacagtttacgaaggagagtaccacgct
gcacattcaaacatcctgaccttctgggaggtgtttgagaaactgacagcagaggaaaag
aaaaaattcctgttgttcctcacaggttctgatcgtgtacctttcctcgggatggagagc
atcaagatgagagtcgccgcgttgcccgattcctctgaaatccacttcccagaatccctc
acctgccattgccttttattacttcccatctacaagagatacccagtggagagaacaatg
catgagaggcttcttcacgctattcatcacaacagaggcttctcgaagaaacgagacatt
acaggctga
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