| Entry |
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| Symbol |
npas1
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| Name |
(RefSeq) neuronal PAS domain-containing protein 1
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| KO |
| K09098 | neuronal PAS domain-containing protein 1/3 |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Brite |
Transcription factors [BR:ssco03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133980609 (npas1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:complement(14451376..14477465)
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| AA seq |
810 aa
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRIFANQGDPPWIPLLEGDSNCSKVRRSSHSLA
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPESASSSASASSLAGTPEPAPSSPHSPADDPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRYRPALVPGSTRSVRRPLGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIYVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DVLQLPESIRAERLRVSSSPTDSSQQARGSQSMKNSVGKSDPDTKAREKFSAAAIQSEDR
RKRLLRSDPEGAPPETRRRLEELRHTEESVSASSDLASESEGEEEEETEWDQGGDSDRLK
QEDGSGGGKHSRGGDTPTRGDRGGRVHNGRAVIQQLKSVVTPSPLPCSPSIKTEHEALTT
GGRWGSHTQTSTSHTHPTQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPS
PALSPAMSVSSPLPREERVVSGVVSRCSGGNGGPDFELLQRLAAGGAAGRVLFHPLALGP
QGPQSLYAPSTIRYAPPELPPSHHHSTGHSDGLQLRSDHHKGPPSAFFPHLQRLAGLPPF
SGFSPSDSPFSSGLPFCMNGLRGAAGSEED |
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| NT seq |
2433 nt +upstreamnt +downstreamnt
atggcaaccatgccgtttgtcagtgaggggaagtgtgtgagtgtggagtgggatttcttg
caaggactgttggccaagcctcccactctgccctgtcttcagaacctgcgtaaagagaag
tctcgcaatgcagctcgttcgcggcgggggaaggagaatttcgagttctttgagctggcc
aagatgctgcctctgcccggggccatcaccagccagctggacaaagcctcggtcatccgg
ctgaccatcagttacctgcatatgcgcatctttgccaaccagggagacccgccctggatc
cctctgctggaaggagacagcaactgcagcaaagtaagacgatcatctcactctctggcc
actgacatatttgaacagcatctaggggcgcacctcctgcagtctctggatggctttgtg
ttcgtggtcagtcaggagggacgatttctctacatctcagagacagtttctatctacctg
ggactctcgcaggtggagctgaccggcagcagtgtgtttgattacatccacccagcggac
cacgttgagatggcggagcggctggggatcaggccgcatctgagggccgaggctggctgt
cacacagcccctgagagcgcttccagctccgcatccgcctcctccctagctggcacccct
gaacctgctccatctagtcctcattctcctgctgatgatcctcccgaccgcggtttcttt
atccgcatgaagtccactctcaccaaaagaggcctgcatgtcaaatcttctgggtacaag
gtgatccacgtgacaggacgaatccgataccgccctgcacttgttccaggctcaacacgt
tcagtgcgtagacctttgggtttggttgcattggcacacacactcccgccttccacgctt
aatgaagtccgcatggagagccagatgtttgtcttccgagtgaacatggacctacaggtc
acatattgtgagaacaggatctcagagtatatggatctgaccccagcagaggtggtggga
catacctgttaccacttcatctatgtagaagatctggagaacctccggcagagccatgaa
gacttgctgaggaaaggccaggtggtgaccggttactaccgttggttgcagaggagagga
ggctacctgtggattcagtccacagccaccgtctcaatcaaccacaaagccccccatgaa
cgcaacgtcatctgggtcaactacgttctcagtcgaacagagttgcctgacacacccctg
gatgtactgcagcttccagagagcataagagcagagcgacttcgagtaagctcctctccc
accgacagctcccaacaggcccgaggctcgcagtcaatgaagaactcagtggggaagagt
gaccctgacactaaagccagagagaaattcagtgctgctgccatccaatcagaggacagg
aggaagcgcctgctgaggtccgaccccgagggcgctccacctgaaacccgacgcaggctg
gaagaactccgtcacaccgaagagagcgtgtcagcctcctcggacctggcgagcgaaagc
gagggggaagaggaggaagagacagagtgggaccaggggggagacagtgacagattgaaa
caagaagacggcagtggaggaggtaaacacagtagaggaggagacacccccactagaggg
gatagggggggcagggtgcacaacggccgggcagtgatccaacagctgaagagtgtagtt
accccgtctcccctgccttgcagccccagcatcaagactgaacacgaagccctgaccact
ggggggcgctgggggtctcacacacagacctccacctcgcacacacaccccacccagccc
caaccatcacatgcacacacaccctccagcagcctcaatggcgacagccccaccacccca
atacccgactcatcatccagcagtgaagcccctccaaaagggttgtttactcccccgtcc
ccagctctgtcccccgccatgtccgtgtcttccccgttgccccgtgaagagagggttgtg
tcgggggtggtcagtcggtgcagtgggggtaacggtggtcctgactttgagctgctacag
agactggctgcaggcggcgcagcagggcgggtcctcttccacccccttgccctcggccct
cagggccctcagagcctctacgcccccagcactatccgctacgctccacctgagctgccc
ccctcccaccaccacagcacaggacacagcgatggcctgcagctacgctcggaccaccac
aagggacccccgtcggccttcttcccccacctacagcggctggctggcttgccacccttc
agtggtttctcaccgtctgacagccctttctcatctggcctgcccttctgtatgaatgga
ctgaggggggctgctggctcagaggaggactga |
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