Scomber scombrus (Atlantic mackerel): 133980614
Help
Entry
133980614 CDS
T10651
Name
(RefSeq) claudin-8-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecules
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133980614
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133980614
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133980614
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133980614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133980614
04147 Exosome [BR:
ssco04147
]
133980614
04515 Cell adhesion molecules [BR:
ssco04515
]
133980614
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133980614
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133980614
Exosomal proteins of colorectal cancer cells
133980614
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133980614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Fuseless
Clc-like
YWFCY
DUF3675
Motif
Other DBs
NCBI-GeneID:
133980614
NCBI-ProteinID:
XP_062275356
LinkDB
All DBs
Position
5:20828703..20829587
Genome browser
AA seq
294 aa
AA seq
DB search
MASYTAYSGYSKPPQSYVGSAYNGYDEKQPQTYAEYEDSVLAEKKRIERKDRREAICCEV
VALVLGFIGLIGVAAVTGLPMWKVTAFIEENIIVMETRWEGLWMNCYRQANIRMQCKVYD
SLLFLPADLQAARGLMCASVAVSTFALIVSAVGMKCTRVVDHRARTKHIVLVAGGCLFLL
ACVTTLIPVSWTGHVIIRDFYNPLLIDAQRRELGEALYIGWVTSAFLFTAGVILLCRHAP
RTQDSDERIVYNPGVNLYQPAYAYQPYSYQPAYTYQPAYSAPPPGSVAYTPSQY
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttacactgcttacagtggctacagtaagccgcctcaatcttacgtgggctct
gcctataatggctatgatgagaagcagccacagacctatgcagaatatgaagactctgtg
ttggcggaaaaaaagagaattgagagaaaggaccgtcgggaagctatctgttgtgaggta
gtggccctcgtcctcggtttcattggactaatcggagtggcagctgtgacgggtctgccg
atgtggaaagtaacagccttcattgaggagaacatcattgtcatggagacccgctgggag
ggtttgtggatgaactgctacagacaagccaacatcaggatgcagtgtaaggtgtatgac
tccctgctgtttctgcccgcagaccttcaggctgctagaggtctgatgtgcgcctctgtg
gctgtgagcaccttcgccctcattgtttcagcagtggggatgaagtgtaccagggtggtg
gaccatcgggctcgcacaaagcatatcgttcttgtggcaggaggctgtctgtttctgttg
gcatgtgttactactcttatccctgtgtcctggaccggccatgtcatcatcagggatttc
tacaaccctctgctcatcgacgcccagcgaagggagctcggggaggctctttacatcggc
tgggtgacctcagctttccttttcactgccggagtgatcctgctctgccgtcacgctccc
cgcacccaggattcagatgagaggattgtatacaaccctggggtaaatctctaccaacct
gcatatgcgtaccaaccatacagctatcagccggcatacacctaccagcctgcctactct
gcgcccccaccaggatctgtagcatacacaccgagtcagtactag
DBGET
integrated database retrieval system
