Scomber scombrus (Atlantic mackerel): 133980694
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Entry
133980694 CDS
T10651
Symbol
tubd1
Name
(RefSeq) tubulin delta chain
KO
K10390
tubulin delta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133980694 (tubd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133980694 (tubd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133980694 (tubd1)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133980694 (tubd1)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133980694 (tubd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
133980694
NCBI-ProteinID:
XP_062275451
LinkDB
All DBs
Position
5:27494537..27498270
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AA seq
442 aa
AA seq
DB search
MSVVTVQLGQCGNQVGHQLFDVICSDAHEAQRIYSCSSCERFFYRSRQGELVARAVMIDM
EAKVINQSLTKAAKSGRWKYGDTSYFSQKQGSGNNWANGYCVHGPRHREVVEELVRREVE
RCDRLAGLMAMMSVAGGTGSGVGTYVTQCLRDIYPKSFILNHLTWPYGTGEVIVQNYNSV
LTLAHLYQLSDAILVHENDTVHRICSQLLNIKHISFSDVNTVIAQQLGSVLQPALTADSH
GVYSRNPLGELVSALACHPEYKLLSVSSIPQMPSSSIAYSTFSWPGMLKHLRQMLISNAK
MEEGIDWQVRPLAGSERTRSLTGPSFNTSLANLLILRGKDVYSAETGGFEDPALYTSWLS
SGEAFTLWKSPVPFNKYEKSATLVSNSQALLKPLDNMVGKAWNMFASRAYIHQYIKFGIS
EEDFLDSFTSLEQVISSYSQLC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgacagtgcagcttggtcagtgcggtaaccaggtgggccaccagctgttt
gacgtcatctgcagtgatgctcacgaggctcagaggatttacagctgctccagctgtgag
aggttcttctaccggagcagacagggagaacttgtggcgagggcagtgatgatagacatg
gaggccaaggtcatcaaccagagtttaaccaaggccgcaaagtctggcaggtggaagtat
ggagacacttcatacttcagtcagaagcagggctctgggaacaactgggctaatgggtat
tgtgtccacggtcctcgtcacagagaagtggtggaggagttggtgaggcgagaggtggaa
cgctgtgacagactggctgggctcatggccatgatgagtgtggcgggggggacgggctct
ggggtcggtacctatgttactcagtgtctccgagacatttaccccaagtccttcatcctc
aaccacctcacctggccgtatgggacgggggaggtgattgtccagaactacaactctgtg
ctgacgctggctcacctctaccagctatcagacgccatcctggtgcacgagaacgacacg
gtgcacaggatctgcagccagctgctcaacatcaaacacatctccttcagcgatgtcaac
acggttatcgctcagcagctgggcagcgtcctacagcccgcactcactgccgactcccac
ggtgtctacagcagaaatcctctgggtgagctggtgagcgccctcgcctgccacccagag
tacaagctgctcagtgtgagtagtatccctcagatgcccagttcctccatagcgtacagc
accttcagctggcctggcatgctcaaacacctccgacagatgctcatctccaacgccaag
atggaggaaggtattgactggcaggtgcgtccgcttgccggctctgagaggaccaggagt
ctcacaggacccagctttaacacctctctggccaacctgctcatactaagagggaaagac
gtctacagtgcagagacaggcggctttgaggacccagccctctacacctcctggctctca
tctggagaagctttcaccttgtggaaatctccagtgccttttaataaatatgaaaaatct
gctacgctagtcagcaacagtcaggctctgctcaaacctctggataacatggtggggaaa
gcctggaatatgtttgcctctagggcctacatccatcagtacatcaagtttgggatctca
gaggaggatttccttgacagctttacatctcttgagcaagtcatctccagctacagccag
ctgtgctag
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integrated database retrieval system
