Scomber scombrus (Atlantic mackerel): 133980695
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Entry
133980695 CDS
T10651
Symbol
vmp1
Name
(RefSeq) vacuole membrane protein 1
KO
K21248
vacuole membrane protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133980695 (vmp1)
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Gene cluster
GFIT
Motif
Pfam:
VTT_dom
TrbL
Wzz
Motif
Other DBs
NCBI-GeneID:
133980695
NCBI-ProteinID:
XP_062275452
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Position
5:complement(27499106..27515457)
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AA seq
405 aa
AA seq
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MAANGASCEQPQKRAGAKDKQNGKSTDASIREKRQADKEERLSLVLWRRPVITLHYFLLE
TLIKLKELTFKLWQRRGAVFLVLVLCSLFSIAYSTEGDHQEYVRHLEKRFLWCAYWVGLG
ILSSVGLGTGLHTFLLYLGPHIASVTLAAYECGSTDFPEPPYPDQIVCPEVEGLEESISI
FSIMSKVRLEACMWGAGTAIGELPPYFMARAARQSGADPDDEDYEEFEEMLEQAEGAQDF
VTRAKLGVQHMVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIK
MHIQKLFVIITFSKHIVEQMVLLIGSVPRVGPSLQKPFSHYLEAQRNKLHHAGKSAPADE
NWLSWVFEKVVLVMVCYFVISIVNSMAQSYVKRLQQQKHSEEKTK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaatggagcaagctgcgagcagcctcagaaacgagcaggagctaaagataaa
cagaatggaaagtctacagacgcatcaataagagagaagcgacaggcggataaggaggaa
cgcttgtctctggtgttatggaggaggcctgttatcacactacattacttccttctagag
accctcatcaagttaaaggaactgacgtttaagctctggcagcgacgaggtgcagtgttc
ttagttttggtgttatgttcactcttctccattgcctactccactgagggggaccaccaa
gaatatgtccgtcacctggagaagaggttcctatggtgtgcctactgggtaggccttggg
atcctgtcctcagtgggccttgggactggcctgcacacatttcttctctatctgggtcct
cacatagcatcagtaaccctggcagcatacgagtgcggttccacagacttcccagaacct
ccgtacccagaccagattgtgtgtcccgaagttgaagggctggaggaaagcatttctatc
ttttcaatcatgtcaaaggttcgcctggaggcctgcatgtggggtgcaggcactgccatc
ggagagctacctccgtattttatggcccgagcagctcgtcagtcaggcgctgacccagat
gatgaagactatgaggagttcgaggagatgctggagcaggctgaaggtgctcaggatttt
gtcacaagagcaaaactgggagtccagcacatggtgcagaaagtgggattctttgggatc
ttggcttgtgcctcaatcccaaatcctctttttgacttggctggaataacctgcgggcat
ttcctggttcccttctggaccttctttggagcaactctgattgggaaagccatcattaag
atgcacatacagaaactttttgttatcattaccttcagcaagcacatagtggaacaaatg
gtgttactcattgggtccgtgcccagagtaggaccatcactccagaagcccttcagtcat
tacctggaagcacagaggaacaagctgcaccatgctgggaaaagtgcaccagcggatgag
aactggctgtcatgggtgtttgagaaggtggtgctggtcatggtctgctactttgtcatt
tccatcgtcaactccatggcccagagctacgtcaagcggctgcagcagcagaagcactcg
gaggagaagaccaagtga
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