Scomber scombrus (Atlantic mackerel): 133980715
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Entry
133980715 CDS
T10651
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
133980715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133980715
NCBI-ProteinID:
XP_062275479
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Position
5:complement(17761763..17777936)
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AA seq
675 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNADIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLTSGYVSSSRAPSSPYHPRQGSDEWPS
SAEALDPGHAWHDKSPSSSTSPAGQNGHIPFPGGMSSPINSNNTGLGGQMQPSPLKKSMS
VIPSSSQACGPEWVSQDDAGGRQNFISTDHAPLSPQSSVASSGSEQTEDQGSMRNTFQED
GSGMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLR
ERQSVLKSLEKDILEGGNLRNALQELQQIIITPIKAYSPPSAAQTAQDTITSPSESTKSG
ADKEPASDGFQSHNPPPCDGDSSATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCY
LQLIEKCLTHEAFTETHKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSNSLPT
AGSVSGGVARRGQRQFQMTPRGLPAGRMGLLSPGGIGGASPRHTLTNPSLAGQGRQNLWF
ANPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCLSM
TEHALGDGTDRTSTI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtaggtatcctcacagattggttcaaaggctggaatgagtgt
gaacagacggtggcactgttgtccctcctgaaacgggtgtcccgcacccaggctcgcttc
ttacacatatgccttgaacactggctggcagactgcacagagatccacatcctagaagct
gaggccaacaatgcagatattgtcagccaatggcaccaggagccaaaggagaaagtggtg
tccttgctgctgtcccatctgcctttgctgcagccacgcaacagcgaggccaaatgcgag
tacatgaagctgctgcagaaggtgttgagtcacactattgagagtagcctgtttgtagaa
gagagcagacagctgctgtcctacgcgctcatccaccctgccaccacactggatgaccgc
acctctttggccatgtggctgaaccacctggaggagcacctaaccagtggctatgtatcg
tcctcccgagccccttccagcccctaccacccacgccagggctcagatgaatggcccagc
tctgcagaggctctcgatcctgggcacgcctggcatgacaagtctccctcatcaagcacg
tctccggcaggccagaatggacacattcctttcccaggtggaatgtcttctcccatcaac
agcaataacacaggtctgggtgggcagatgcagcccagccctctgaagaagtccatgtcc
gttatcccttccagttcccaggcttgtggccctgagtgggttagccaggatgacgcaggg
ggccggcagaacttcatttcaacagatcatgcacccctctcccctcagagcagtgtggcc
tcctcgggcagtgagcagacagaggaccagggctccatgcgcaacaccttccaggaggat
ggtagtggcatgaaagatgttcctgcatggttgaaaagtctccgccttcataaatatgca
tcacttttctcccagatgacctatgaagagatgatgattctaacagagcagcacctggag
tcacagaacgtcactaaaggagcacggcataagattgccttgagtatccagaaactgcga
gagaggcaaagtgtgctcaagtctttagaaaaggacattttggaaggaggaaacctgcgc
aacgccctccaagagctgcaacagatcattatcacacccatcaaggcctatagcccaccc
agtgccgcacagactgcccaggacacaatcacctctccctcagaatccacaaaatcagga
gcagataaagagccggcctcagatggcttccagtcccacaacccacctccctgtgatgga
gactcctcagccacacccatctcagatggcgacattgctggacagttcacccgtgtgatg
ggtaaagtgtgcacccagctacttgtgtcaagaccagacgaggagaatatcagctgttac
cttcaactcattgagaagtgtttgacacatgaggctttcacagaaactcacaagaaaagg
ctggtctcctggaagcagcaggtccttaaactgctccgcctgttccctcggaaagctatg
ctggacatgcctgtgtaccgacagaaaggctggacctatgggtccaactccctccccaca
gcaggctctgtgagtggaggtgtagcccggcggggccaaaggcagttccagatgacccca
cgtggactcccagctgggcgcatgggtcttcttagtcccggtgggatcgggggagcgtct
ccacgtcacacactcactaatccttcactggcaggccagggtagacaaaacttgtggttt
gccaaccctgggggcagtaacagcatgccaagtcagagccgcagctctgtgcagcggacc
cactcactccctgtccacacttccccgcaaaccatgctcatgttccagcagcaagaatgc
caagttccaggtgctgacctggagatcaaccccacgctggagtcactgtgcctcagtatg
acagagcatgccttaggggatggaacagaccggacatcgacaatatga
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