Scomber scombrus (Atlantic mackerel): 133980804
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Entry
133980804 CDS
T10651
Symbol
gbe1b
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00500
Starch and sucrose metabolism
ssco01100
Metabolic pathways
Module
ssco_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
133980804 (gbe1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133980804 (gbe1b)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
133980804 (gbe1b)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133980804 (gbe1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
hDGE_amylase
DUF5696
Motif
Other DBs
NCBI-GeneID:
133980804
NCBI-ProteinID:
XP_062275594
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All DBs
Position
5:21087612..21171742
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AA seq
688 aa
AA seq
DB search
MADQEDNVTIPKFDCLLQMDPYLKAYEKDFKRRYELFQKQLILLEEVEGGFDQFTRSYYT
HGVTRRPDNSLFFKEWAPAAEALFLTGDFNGWDKFSHPYTKKEYGKWELTLPPKLDKSPA
VDHNTKLKVVVHTKDGKRLYRISPWAKYVTRDEGRVIYDWVHWDPLLPYIQIHPRPKKPT
SLRIYEAHVGIASPEEKIASYTNFITNVLPRIKELGYNCIQLMAVMEHAYYASFGYQVTS
FFAASSRYGTPEELKQLIDVAHSMGIVVLLDVVHSHASQNTEDGLNQFDGSDSCFFHSPP
RGEHKQWGSRLFNYSSWEVLRFLLSNLRWWIEEYRFDGFRFDGITSMLYHHHGIGISFSG
DYSEYFGLHVDEDSLTYLMLSNHILHTLYPDCITIAEDVSGMPALCRAVEEGGLGFDYRL
AMAIPDKWIQILKEKKDEEWDMGNIVHTLINRRYAEKSIAYAESHDQALVGDKTLAFWLM
DKEMYTNMSTTVPMTAVIDRGMQIHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPREG
NGNSYLYARRQYYLADMDLRYGQLYVFDRDMNRTEDKYGWLAAPPANVSASHEEDKVIVF
DRANVLFIFNFHPTKSYQGYRVAVESPGRYKIKLDTDEALYGGHGRLDHNTEFFTEPVPF
KGHPNSMQVYIPCRTAIVLANAEIDYCY
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaagaggataatgttaccattcccaagttcgactgccttctccaaatggat
ccctatctcaaagcgtacgagaaggacttcaagcggaggtatgagctgttccagaagcag
cttatactgctggaagaggtagaaggaggctttgaccagttcacacgcagctactatacc
catggtgtgacgcggcgccctgacaacagcctgttctttaaagagtgggctccagctgca
gaggccctctttcttaccggtgacttcaatggctgggacaaattctcccacccttacacc
aagaaagaatatggcaagtgggaactgactctaccgcccaagcttgacaagtctccagct
gtggatcataacaccaaactcaaggtggtagttcacaccaaggatggtaagcgactgtac
cggatctcaccatgggcaaaatatgtgaccagggatgagggccgtgtcatctacgactgg
gttcactgggatcccctactaccttatattcaaatccaccctcggccaaagaaacccacg
agcctgagaatatatgaggcccacgtgggcatcgcttcacctgaggaaaagattgcatca
tacaccaacttcataaccaacgttctgcctcgtataaaagaactgggttacaactgtatt
cagctgatggctgtcatggagcatgcctactatgcaagttttgggtatcaggttacaagt
ttctttgctgcttccagtcgctatggtaccccagaggagctgaagcagctgattgatgtg
gctcattcgatgggcatcgtggtgctgctcgacgttgttcacagccacgcctcccagaac
actgaggatggcctcaaccaatttgatggctctgactcgtgcttcttccactcacctccc
aggggggaacacaagcagtggggcagccgcctcttcaactactccagttgggaagtgctg
cggttcctattgtcaaacctgcgctggtggatagaggaatatcgctttgacggcttcaga
ttcgatggaattacctcgatgctgtaccatcaccatggcatcggcatctccttttcaggg
gactacagcgagtacttcggcctacatgtggacgaagactctttgacttacttgatgctc
agtaatcacattcttcataccctttatcctgactgcatcaccattgctgaggatgtgtca
gggatgcctgctctctgcagagcagtggaggagggaggacttggttttgattaccgacta
gctatggccattcccgacaagtggattcagatcctgaaggagaaaaaggatgaggagtgg
gacatgggcaatattgtccacacactgatcaacaggcgttacgcagagaaaagcatagcc
tatgcagaaagccatgaccaggctctggtcggggataagactctggccttctggctgatg
gacaaggagatgtacaccaacatgagcaccacggttcccatgacagccgttattgaccgt
ggcatgcagatccataagatgatccgcctcatcactcatggtctgggtggagaggggtac
ctcaacttcatggggaatgagtttggccatcctgagtggctggatttccccagagaaggg
aacgggaacagttacctgtatgcccggcggcagtactacttagcggatatggacctccgc
tacggtcagctctacgtctttgaccgggacatgaaccgtaccgaagacaagtacggctgg
ctggctgccccacctgccaacgtcagcgccagccatgaagaggacaaggtcattgtgttt
gacagggcaaatgtgctctttatcttcaacttccaccccactaagagctaccagggctac
agggtggctgtagaaagtccaggaagatacaaaatcaagctggatacagatgaggctctg
tatggaggtcatggacggctggaccacaacactgagttcttcactgagcctgtgcccttc
aaaggtcatcccaactccatgcaggtctacatcccctgcagaacagctattgtcctggcc
aacgcggagatagattactgttattag
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