Scomber scombrus (Atlantic mackerel): 133980822
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Entry
133980822 CDS
T10651
Name
(RefSeq) claudin-3-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133980822
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133980822
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133980822
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133980822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133980822
04147 Exosome [BR:
ssco04147
]
133980822
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133980822
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133980822
Exosomal proteins of colorectal cancer cells
133980822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
133980822
NCBI-ProteinID:
XP_062275613
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All DBs
Position
5:23429913..23430590
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AA seq
223 aa
AA seq
DB search
MFRQLEFAALGVAFTGWLCAILTRCLALWKVSGTLDNTTASLPAYWDGVWLEWDHWDLAH
DGSLHCSFYQSLMSLSGSFRTWRALIMAAIGAGAFAAVIGAVGAVWFPNRGQIKVFSGAL
FVLSGMLLLVPTAWTCHHTSQPLEGAVLLRRDWGPALYVGWISFALMLVGGVFLTTRCPD
FDRQAQQTESSYANTEEDANHPLSRINRTTFTHSQYERRPEPI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggcagctggagttcgctgccctgggtgtggccttcacagggtggctttgtgcc
attctgacgcgctgcctggccctttggaaagtgagcggcactctggacaacaccaccgct
tccctgcctgcctattgggatggggtgtggctggaatgggaccactgggacttggcccac
gatggaagcctacactgctccttttaccagtctctcatgtctctttctggaagttttcgg
acgtggagggcgctcatcatggcagccatcggtgccggggcttttgctgcagtgattgga
gcagtgggggctgtgtggttccctaaccgtggccagatcaaagtgttttctggtgctctc
tttgttttgtctggaatgctgctgctggttcccacagcctggacatgccatcacaccagt
cagccactggagggagctgtgctgctgagaagagactggggaccagcgctgtatgttgga
tggatttcatttgccttgatgctggtcggaggggtctttctcaccaccagatgccctgat
tttgacaggcaggcacagcagactgagagcagttatgcaaatacagaagaggacgctaac
cacccactgagcaggatcaacaggactacgttcacacacagccagtatgagcgcagacca
gagcctatctga
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integrated database retrieval system
