Scomber scombrus (Atlantic mackerel): 133980831
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Entry
133980831 CDS
T10651
Name
(RefSeq) protein jagged-2
KO
K06052
jagged-1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04330
Notch signaling pathway
ssco04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133980831
04371 Apelin signaling pathway
133980831
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssco04090
]
133980831
CD molecules [BR:
ssco04090
]
Proteins
133980831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
EGF_TEN
hEGF
EGF_DL_JAG
DSL
JAG1-like_EGF2
EGF_2
EGF_Teneurin
EGF_3
EGF_CA
cEGF
FXa_inhibition
DUF5650
Motif
Other DBs
NCBI-GeneID:
133980831
NCBI-ProteinID:
XP_062275624
LinkDB
All DBs
Position
5:complement(15211852..15260894)
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AA seq
756 aa
AA seq
DB search
MESTRAHRITRLDPTNGNVKITGKPDMRADRHRGHLHLQRTVIFLFALTIQLQSVCAVGM
FELQIRHFQNLHGHLQTGHCCDLQSIGGPGGSCSARDQCDTFFQACLKEYQARVAPAGAC
TFGSGTTGILGGNSHSLHHRGQDGGGGGAEDGSNGHIVIPFKYAWPKSFSLVLEALDYDN
DTSESGQLIERVLLSSMLNPGEQWQTHRYHGRTLSLEYRLRFRCDSNYYGPFCNKFCRAR
NDFFGHFSCDPSGSKVCLDGWMGSECKDAVCRQGCHQAHGSCTEPGECKCHYGWMGPLCD
QCVTFPGCVYGSCNEPWQCVCDVNWGGLLCDKDLNYCGTHQPCKNSGTCTNTEPNEYQCE
CQEGFRGRNCDIVEHACLSSPCANGATCVEDPTGFSCICSDSWTGPTCTDAVRQCDRSPC
GRGATCQEAPGGYRCLCPPGWTGRTCQLDTNECERNICVHGRSCRNLIGGYLCDCLPGWT
GSNCDIRNSSCQGLCLNGGRCEDLISGSRCLCPPGFSGKYCQIGPSPCDSAPCLHGGQCV
EKDGLTITCNCPKGYSGIFCEVVLDLCNPNPCQQGVTCHSIEGRYMCACPEGYYGNECIS
LKNPCIGPHCPGAMSDTTHGGVSFYMVLVGVLALVTVCGCAACAFILSHLHQKRKKQQAV
PQEEGINNQREFVNLIRNVDRPVPLLPPAAPLTHTPAPAPVSRCYEEIELTLPPSPAPSH
PSPALKPAHAPKLDISNREREKLNRFHHTDNQELEV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagagtacaagagcgcacaggataacgcggctcgatcccacaaacgggaacgtaaag
atcaccgggaagccagacatgagggctgaccgacaccggggacacctccacctgcagcgg
actgtgatttttctctttgcgctcacgatacaactgcagtctgtgtgcgcggtcgggatg
ttcgagcttcaaatccggcacttccagaacctgcacggacatctgcagaccggacactgc
tgcgatctccagtccatcggggggccgggtggttcctgctctgcaagggaccagtgtgac
actttctttcaagcctgtctcaaggagtaccaggcccgagttgccccagctggagcctgt
acctttgggtcaggcacaacagggatcctaggtggaaactcccattcgctccaccaccgg
ggtcaagatggaggaggaggaggagcagaggatggatctaatgggcatattgtcattccc
ttcaaatacgcctggccaaagtccttctctctggtgttggaggctctggactacgacaat
gacacatcagaatcaggtcagttgatcgagcgtgtcctcctctcctcaatgttgaaccct
ggtgaacagtggcagacgcatcgttaccatgggcggactctcagcctggagtaccggctc
cgcttccgctgcgactccaactactacggacctttctgtaacaagttctgccgggcccgc
aacgacttcttcggtcacttcagctgtgaccccagtggctccaaggtctgcctggatgga
tggatgggatcagagtgcaaagatgcggtgtgcaggcagggatgtcaccaggcccacggc
tcctgtactgaacctggagaatgcaagtgtcattatggctggatgggtcctctgtgtgac
cagtgtgtgacgtttcccggctgtgtgtacgggagctgcaatgagccctggcagtgtgtg
tgcgacgtcaactggggcggactgctgtgtgacaaagatctgaattactgtgggacccac
cagccctgtaagaacagcgggacctgcaccaacacagagccgaacgagtaccagtgtgaa
tgccaggaaggcttcagaggacgcaactgtgacattgtggagcatgcatgtttgtcatcc
ccgtgtgcgaacggagccacctgtgtggaagacccaacgggcttcagctgcatctgctct
gacagctggaccggacccacctgcacagacgcggtgaggcagtgtgatcggagtccctgc
ggacgtggagcgacgtgtcaggaggctcctggaggataccggtgcctctgcccgcctgga
tggaccggcaggacgtgccagctggacaccaacgagtgtgaaaggaatatatgcgtccat
ggccgctcttgtcgcaacctgatcggtggatacctgtgtgactgccttcctggatggaca
gggtcaaactgtgacatcaggaacagtagctgtcagggtttgtgtctgaacggcggacgt
tgtgaggacctgatatcaggatccagatgcttgtgcccacctggtttctctggaaaatac
tgtcaaatcggcccgagtccttgtgatagcgccccctgcctgcacggaggacagtgtgtg
gagaaagatggactgacgattacctgcaactgtcccaagggatattcaggaatcttttgt
gaggtggtgttggatctgtgcaatcccaacccttgccagcagggggttacctgtcacagc
atagagggcagatacatgtgtgcctgtcctgagggttactatggcaacgagtgcattagc
ctcaaaaacccctgcattggtccacactgtccaggcgcaatgtctgacacgactcatggg
ggcgtcagcttctacatggtgctggtgggagttttggctttagtgacagtctgcgggtgt
gcggcctgcgccttcatcctctcccacctccatcaaaagcggaaaaagcagcaggccgtc
ccacaggaagaaggcatcaacaaccagagggagtttgtaaatctcatcagaaacgtggac
cgtcccgtgcccctcctgcctcccgccgccccactcactcacacaccagcccccgcccct
gtctcacgttgctacgaggagattgaactcaccctgccgccctccccagccccctcgcat
ccctccccggcactaaagccagcccatgcccccaaattggacatttcaaaccgggagagg
gagaagttgaaccgcttccaccacacagacaaccaggaactggaggtctga
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