Scomber scombrus (Atlantic mackerel): 133980885
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Entry
133980885 CDS
T10651
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133980885 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133980885 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133980885 (usp16)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133980885 (usp16)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133980885 (usp16)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133980885 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
133980885
NCBI-ProteinID:
XP_062275723
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All DBs
Position
5:complement(20879396..20885796)
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AA seq
841 aa
AA seq
DB search
MGKKRGKDKSSREDEEIDLAGPSCRHIKKGTDQTLLKKLSGNSDWMNCQDCKPEENDKNT
STTQPRDPEEEKEPAAVWLCLKCGHRGCGRHSENQHAIKHYETPRSDPHCLVISLDNWSV
WCYICDDEVHYSSTGQLAQLVTNLKKHTSADPMKRPQKRVKEEDSMLEVEQKTETVKAEE
SEDKENKENKGHQKKNTKKESVGKSQNSNTMEDTGGVSVKGLSNLGNTCFFNAVIQNLSQ
TQLLRQTLNKVTEEKMSLNIEPNTSSDLEPIVVQVDQPGSLTLTMCQLLNEIQESKKGVV
TPRELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEIKRVSSGIMETLKQSRQSTDG
EQLKTLVKEYEKNGFPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVSEEAYR
KKNQKKVSPKTSDSNQDDIDSPALTNGNDDIPSGTGSKYQQKKAKKQAKKQAKHQKRQQK
LEGRVTLNSLASPSEQTDPAAEEEDGENADIETHDEAPQSEGDSAQTSVSEENLKNLDTV
QAEKEEEEDSVIDCDSMDISSVSNRFTILEEQHSKDSNLDEEKTSDMDQEAEEDTQLVSE
MEKVTLDDAFIESDAGEQIVESEDEPLENKEYTVVNQDPELAFETLATRSSPEKQECSVQ
SCLFQFTEVETLTQNNSLLCVACTKRQPNKDKAGGSKKNIYTDALKQMLISSPPPVLTLH
LKRFQQNGYTICKVNRHVHFPVILDLAPFCAVKCKNVTEGDNQILYSLYGVVEHSGTMRS
GHYTAYVKVRPQCPKSSSNGLAAEETPRGSWFHISDTSVQPVSESKVQSSQAYLLFYERI
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaagagggaaggacaagagctccagagaggatgaagaaatagacctggca
ggtccatcatgtaggcacattaagaagggaacagaccaaactcttctcaagaaactttct
gggaattctgattggatgaattgccaggattgtaagcctgaggaaaatgacaaaaatacc
agcaccacccagcctcgggacccagaagaggaaaaagagccagcagcagtatggttgtgt
ttgaaatgtggccatagaggatgtggacgacactctgagaaccagcatgccatcaaacat
tatgagactcctcggtcagacccacattgccttgtgatcagcttggacaactggagtgtg
tggtgttatatatgtgatgatgaagtccactactctagtactggacaattggctcagctg
gtgaccaaccttaaaaagcacacctcagcagatcccatgaagagaccacagaaaagggta
aaagaggaagacagcatgttggaagtagagcagaagacagaaactgtaaaagcagaggag
agtgaagacaaggaaaacaaagagaacaagggccaccaaaagaaaaacaccaagaaagag
agtgttgggaaatcacaaaactccaacacaatggaagacactggtggtgtctctgtgaag
ggactgagcaacctgggaaacacatgtttctttaatgcagtgattcagaacctctctcaa
acacagctgttaaggcagactctcaacaaagtgacggaagagaagatgagtcttaacatt
gaacctaatacctcctcagatctggagcctattgtagtgcaggtagaccagccaggatcc
ctgactttgacgatgtgtcaactcctcaatgagatccaagaatctaagaagggtgtggta
acaccgcgggagttgttcacacaagtctgtaaaaaggctgccaggttcaaaggatttcag
cagcaagatagccaggagctgctgcgttacctgctggatggaatgagagctgaggagatc
aaaagagtaagctcagggataatggagacattgaaacaatctagacaaagtacagatgga
gagcagctgaaaactctagttaaagaatatgagaaaaatggatttccaaaaaactttgtt
gaccaagtttttggtggggaaatgaccagcactataatgtgtcagcagtgtaaaacggtg
tctgtagtcacagagatgtttctggatctttctcttcctgtttctgaagaggcatatagg
aagaagaaccagaaaaaagtaagtccgaagaccagtgactcgaaccaagatgacatagac
agccctgctttgacaaatggaaatgatgacattccctctgggactggaagcaaataccag
cagaaaaaagccaagaagcaggcaaagaagcaagcaaagcatcaaaagaggcagcagaag
cttgagggccgagtcactctgaacagtcttgcatctccaagcgaacagacagatcctgct
gcagaggaagaagatggagaaaatgctgacatagagacacatgatgaagccccacagagt
gaaggagattctgcacaaaccagtgtctctgaagagaacctgaagaaccttgacacggtt
caagctgagaaggaagaagaggaggattcagtgattgactgcgactcaatggatatatcg
tcggtcagcaatcgtttcaccatcttagaagagcaacactcgaaagatagcaacttagat
gaggagaaaacatctgatatggatcaggaggcagaagaagacacacagctagtgagtgaa
atggagaaagtcaccttggatgatgccttcatagaatctgatgctggggaacaaatcgtg
gagagtgaagatgaaccgctggagaataaagagtatactgtagtaaaccaggacccagag
cttgctttcgaaacactggccaccaggtcatctcctgagaaacaggagtgttctgtacag
tcgtgtctgtttcagttcacagaagtggaaaccctcacacagaacaacagccttctgtgt
gtcgcctgcactaaacgacagccgaacaaagacaaagctggaggatctaagaagaatatc
tacactgatgccttgaagcaaatgctgatctcctctcccccgccggtgcttaccctccat
ttgaagagatttcagcagaatggctacactatttgtaaagtgaacagacacgtccacttc
cctgtgatactggatcttgctcctttttgtgcagtaaaatgcaagaacgtgacagaggga
gataatcagattttgtacagcctgtatggtgttgttgagcacagcggaacaatgaggtca
ggccattacacagcctatgtaaaagttcgacctcagtgccctaaatcctcatctaatgga
cttgcagcagaagagacacccagaggatcctggttccatataagcgacacaagcgtccag
cctgtgagcgagagcaaagtccagagtagccaagcctacctcctattctatgaaaggatc
ctctaa
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