Scomber scombrus (Atlantic mackerel): 133980911
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Entry
133980911 CDS
T10651
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133980911 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133980911 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133980911 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133980911 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133980911 (si:ch211-11n16.2)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
Others
133980911 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
133980911 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
MqsA_antitoxin
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
133980911
NCBI-ProteinID:
XP_062275761
LinkDB
All DBs
Position
5:complement(7397695..7406263)
Genome browser
AA seq
655 aa
AA seq
DB search
MSEILMKEMENILISPMKPEARAGGVQSFLLVDEQENLQVRNESQFLDRLCCGDVAGVKV
LSIFGNTGDGKSHTLNHILFGGETVFYTSKSPSSCTVGVWAAYDPNLSLLALDTEGLLGA
AANQNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFQFLSSASGAYLKHFTPELRALSTRC
GLDVPLSCLGPAVIVFQETTHTQLLGHDSKAAGHADTQLQKRFHDLGLGTEAFSSMQYVG
TQTITPPTDYNCLLEAVKQQVKNTHTRSPRQPGIVFHALEALSERFCGELSDDKMTLYSF
FPDEYFTCSAVCLSCNIRCKNGMNHLKDRVPHMADGLCQYAHQFNNKVLICKRCYEGGRE
MIVVPKTSASSDNPWFGLAKYAWSGYVLECSSCGVIYRSRQYWMGNQDPESGVVRSEVKH
VWEGSDTFLTNHQNAAQRVLDGMNCVIQSVSEYSTGPTKAVTAWLTDQVAPPYWRPNTDI
TACHGCQKVFEEAERKHHCRSCGEGFCHPCSSHRMPVPERGWGSSPVRVCKACYRQGGPT
DTNSQVCKVEPRGLIARRVTEVAQSTLDMVTTAVDYPICFVKDVARPDYWVPDQDITQCY
QCSKTFTPIMSKHHCRACGQGVCGPCSTHLKPVPSRGWDHPVRVCDSCHARTDSL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatcctaatgaaggaaatggagaatatactgatcagtccaatgaagccagag
gcgcgtgcgggcggtgtgcagagcttcctgctggttgacgaacaagaaaacctgcaggtc
cgcaatgagtctcagtttctggacaggctctgctgtggggacgtggcaggcgtcaaagtc
ctctccatctttgggaacacaggtgacggcaagtcacacaccctcaatcacatcctgttt
ggtggcgagacagtgttttatacctccaagtcccccagttcctgcacagtgggtgtgtgg
gccgcctatgaccccaacctcagccttctcgccctggataccgagggcctgctgggggcc
gcggccaatcagaaccagagaatgcggctgctgctgaaggtgttggcagtgtctgatatt
gtagtctatcgtacacgagctgagcgcctccacaatgatatgttccagttcctgagcagt
gcctcaggggcctacctgaagcacttcactcctgagctgagggccctgtccacccgctgc
ggtctggacgtgcccctgtcatgtcttgggcctgccgtcattgtctttcaggagacaacg
cacacccagttgctgggtcatgactctaaggcagccggccacgctgacacgcagctccag
aaacgttttcacgacctgggtttggggaccgaggccttcagctcaatgcagtatgtaggc
actcagaccatcacacctcccaccgactacaactgtctgctggaggctgtcaagcagcaa
gtaaagaacactcacacacgctccccccgccagcctgggatagtgtttcatgcgctggaa
gccctaagtgagcgtttctgtggggaactgtcagatgacaagatgactctgtactccttc
ttccccgatgagtactttacctgctccgctgtttgcctcagctgcaacattcgctgtaaa
aatggaatgaaccatctgaaagaccgggtcccccacatggcagatggtctgtgccagtat
gcacaccagttcaacaacaaggtgctcatctgtaagaggtgctatgaaggaggcagagag
atgattgttgtgcccaagacttcagcttcctctgacaacccgtggtttggactggccaaa
tatgcctggtcaggttatgtgttggagtgttccagctgtggtgtaatctaccgcagcaga
cagtactggatgggaaaccaggacccagagagtggcgttgtgcgatctgaggtcaagcat
gtctgggaggggtcggacaccttcctgaccaaccaccaaaacgccgcccagagggtcctg
gatgggatgaactgcgtgatccagtcagtgtcggagtacagcaccggccccaccaaagcg
gtcactgcctggctcactgaccaggtggcgccgccatactggagacccaacacagacatc
actgcctgtcatggctgtcagaaggtgttcgaggaggcagagaggaagcaccactgccgt
tcatgcggtgaaggtttctgccatccctgctccagccacaggatgccagtgccagagagg
ggctggggcagcagtcctgtcagggtgtgtaaggcctgctaccgccagggagggccaacc
gataccaacagccaggtgtgtaaggtggagcctcgtggtctaatagctcgcagggtgacg
gaggtggctcagtctacgctggacatggtcaccacagctgtggactaccctatctgtttt
gtgaaggatgtggctcgaccagactactgggtgccagatcaggatatcacccagtgctac
cagtgctccaaaaccttcaccccaataatgtccaagcaccactgcagggcctgcggacag
ggtgtgtgcggtccctgttctacacacctcaagccagtaccctcccgaggctgggatcac
ccggtcagagtgtgcgacagctgccacgcccgcacggatagcctgtaa
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