Scomber scombrus (Atlantic mackerel): 133980947
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Entry
133980947 CDS
T10651
Symbol
arcn1b
Name
(RefSeq) archain 1b
KO
K20471
coatomer subunit delta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133980947 (arcn1b)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133980947 (arcn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adap_comp_sub
Clat_adaptor_s
SPT2_N
Motif
Other DBs
NCBI-GeneID:
133980947
NCBI-ProteinID:
XP_062275813
LinkDB
All DBs
Position
5:3752781..3764050
Genome browser
AA seq
510 aa
AA seq
DB search
MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETDSVRYVYQP
LEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALG
YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERSGKKV
PAFGGFGSGGMTSVSSGSIITDTIVEPEKPKITPASVRPSGPSKALKLGAKGKEVDNFVD
KLKSEGETIMPTTGKRGSEVSKALPPPVNVESVHLRVEEKISLTCGRDGGLQNMEVLGMV
TLRVSDDKNGRIRLIINNNDNKGLQLQTHPNVDKKLFTADSVIGLKNPEKSFPLNNDVGV
LKWRLQTTDEALIPITINCWPSESGTGCDVNIEYELQEDSLELNDVVISIPVPSGVGAPV
IGDLDGEYKHDSRRNLLEWCLPVIDANNKTGSLEFSIAGQPNDFFPINVSFVSKRNYCDI
QVTKATYVDGDGPVRFSSETSFVVDKYEIL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgttggcagcggcggtgtgcaccaaggccggcaaggccatcgtatcgcggcag
tttgtggaaatgacccggacgcgtatcgagggtctcttggccgcgttccctaaactgatg
aacacgggcaagcagcacacctttgtggaaacggacagtgtacgctatgtgtaccagcct
ctggagaaactctacatggtcctcatcaccaccaagaacagcaatatcctggaggacctg
gagacactcagactcttctctcgagtgatcccagaatactgtcgcgtgctggaggagagt
gaaatatcggagcactgtttcgacctgatcttcgccttcgacgagatcgtggcgctgggc
tacagagagaacgtcaacctggctcagatccgcaccttcacagagatggactctcacgag
gagaaggtgttccgtgccgtcagagagacccaggaaagggaggctaaggcagagatgagg
aggaaggccaaggagctgcagcaggccagacgggacgcagagcgctccggaaagaaggtg
ccggctttcggaggcttcggcagcggcggcatgaccagcgtctcctcagggtccatcatc
acagacaccatcgtcgagcccgagaagcccaagatcacaccagcctcagtcagaccaagt
ggacccagtaaggctctgaaactgggcgctaaagggaaagaggtggacaactttgtggac
aagctcaagtctgagggtgaaaccatcatgcctaccacaggaaagagaggctcagaagta
tctaaagctttgccaccaccagtcaatgtggagagcgtacatctgcgcgtggaggagaag
atctcgctgacttgcggccgtgacggcggcctacagaacatggaggtgctgggcatggtg
acgctgcgagtctcggacgacaagaacggacgcatccgcctcatcatcaacaacaacgac
aacaaaggactgcagctgcaaacacatcccaacgtggacaagaagttgttcacagctgac
tcagtgattggcctgaagaacccagagaagtctttccctctcaacaatgatgtgggcgtg
ctgaagtggagactacagaccacagacgaggccctaatacctataaccataaactgctgg
ccctctgagagtggaactggctgtgatgtcaacattgaatacgagctgcaggaggacagc
ctcgagctcaacgacgtggtcatcagcatccctgtaccgtctggcgtcggcgcccctgtg
atcggcgacctggacggagagtacaaacacgacagcaggcgaaacctcctggagtggtgc
ctacccgtcatcgatgccaacaacaagaccggcagcctggagttcagcatcgccggccag
cccaatgacttcttccccatcaatgtgtcctttgtgtccaaacgcaactactgcgacatc
caggttaccaaagcgacttacgtagacggagacggccccgttagattctcttcagaaacc
tcctttgtcgtcgacaaatacgaaatcctgtaa
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