| Entry |
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| Name |
(RefSeq) homeobox-containing protein 1-like isoform X1
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| KO |
| K24885 | homeobox-containing protein 1 |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Brite |
Transcription factors [BR:ssco03000]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133981039
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
1:7818910..7835547
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| AA seq |
512 aa
MFQQCEEPRFTIEQIDLLQRLRRTGITQAEVLHALDTLDHLDRQHGHKLTHKPSYLPPTS
SLSSSSTAAASSSMMSIATQTTFPNNRLTLSPSNAFDTTSPLLPVTVASPVAMAAVAQNG
LVAVANGKLSPPRFPLGVVSGGVAAPGYGFETSEEDMDVDDKVEDLMRRDSAVIKEEIKS
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKTNPGATLAMR
AAPLALEDVMDWHQAPPQFGPAPGGFRLRRGSRFTWRKECLAVMESYFSDNQYPDEAKRE
EIATACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSP
GGQSNSDEVDGNDFPDQGCEVSLFDKRASARQFGFSRADLSSPTQVPTLLPSWFSALGRG
GLSGQRGASLIGRSLVSVAGPQAEGSRLTGVSWSPPSPSLQDEPTIHSALSESQDPISLE
KAAEGHTNPANQVDEAGCSLGSDIKTETLEDD |
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| NT seq |
1539 nt +upstreamnt +downstreamnt
atgttccagcagtgcgaggagcctcgtttcaccatcgagcagatcgacctcctccagagg
ctaaggaggacggggatcacccaggcggaggtcctccacgccctggacaccctggaccac
ctggaccgccaacatggacacaagctgacccacaaaccttcctacctgcctccgacgtct
tccttgtcttcttccagcaccgccgccgcctcttcctccatgatgtccatcgccactcag
acgactttccccaacaaccgactcacgctgtcgcccagcaacgccttcgacaccacctcc
ccgctgctcccggtcacggtggcctcgcccgtcgccatggcagcggtcgctcagaacggc
ctggtcgctgtcgccaatgggaagctgtcaccgccgcggtttcctctcggcgtggttagc
ggtggcgtggcggcaccaggatacgggtttgagaccagtgaagaggacatggatgttgat
gacaaggtggaggacttgatgagaagagacagcgctgtgatcaaagaggagattaagtcc
ttcctggccaacaggcggatctcccaggctgtggtggctcaggtaacagggatcagtcag
agtcggatctcccactggctcctacaacaggggtcggacctcagcgagcagaagaaacga
gccttcttccgttggtaccagctggagaagaccaatcctggtgccactctggccatgcga
gccgccccattggctctggaagacgtgatggactggcaccaagccccgccccaatttggc
cccgcccccggaggtttccgcctacgacgaggtagcagattcacctggaggaaggagtgt
ctggctgttatggagagctacttcagtgataaccaataccccgatgaagcaaagagagag
gagattgccaccgcctgcaacgccgtcattcagaaaccaggaaagaagctgtctgatttg
gagagggtcacatctctgaaggtctacaactggtttgccaaccgccgcaaagatataaag
aggcgcgctaacatcgaagcagccatcttggagagccacggtatcgaggttcagagtcca
ggcggtcagtccaacagtgacgaagtggatgggaacgacttccctgaccagggttgtgag
gtgtccttatttgacaaaagagcttcagccaggcagtttggtttcagtcgagctgatctg
tcttctccaacccaggtccccacgctgctccccagctggttctccgccctgggcagagga
ggcttgtctggacagcggggcgcttctctgatcggccgctccctggtgtcggtggcaggt
cctcaggctgaaggttccagattgacaggcgtgtcatggtctcccccgtccccatctctc
caagacgaacccaccattcacagcgcgctgtccgagtcccaggatccaatcagtttggag
aaggcggccgaaggtcacaccaacccagccaatcaggtggacgaggcagggtgcagtttg
gggagcgacatcaagacggaaacgctggaagatgactga |
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