Scomber scombrus (Atlantic mackerel): 133981080
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Entry
133981080 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133981080
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133981080
NCBI-ProteinID:
XP_062275952
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Position
5:33073580..33106767
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AA seq
1187 aa
AA seq
DB search
MKSDWSMDRPIAFKDGQPADGRMQQQRADSPEPSCVSMKSDWSMPRPISFKDGQPADGTM
QQQRADSPEPSCVSMKSDGSMYEPLTFKDGQPADGRVQQQSSEVPSDQSAQQHQTQLDAI
FMLLEENIVTFVKNELKRVQRGLSPDYPECLKSQNEDKEVLDGEEEEQRRSSRDAFLKIT
LHFLRRMKQEDLAERLQRRTRAAKCRRKLKSNLQKKFQCLFEGIAKAGNPTLLNQIYTPL
YITKRGTAEVNDEHEVRQIETASRKPDRPETTITQEDIFKASPGRDEPIRTVMTKGVAGI
GKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHHFFTETKEAGIC
RFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITT
RPAAANQIPPECFSMVTEVRGFTDPQKEEYFRKRFRDEKQASTIISHIKTSRSLHIMCHI
PVFCWITATVLEDVLKSREGGELPKTLTEMYIHFLVLQSKLKNIKYEGGAETDPHWSPES
RKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEERGLYQDKVF
CFVHLSLQEFLAALHVHLTFIKSGVNLLEEEQTTSCWSKVFKDKTKPTRFYQSAVDEALK
SPNGHLDLFLRFLLGLSLQTNQTLLRGLLTHTGSSSQTNQETVQYIKKKISENLSAERSI
NLFHCLNELNDRSLVEEIQQYLRSGSLSTDKLSPAQWSALGFILLSSEKDLDVFDLKKYS
ASEEALLRLLPVVKFSNKALLSDCNLSERSCAALSSVLSSQSSSLRDLDLSNNDLPDSGV
KQLCDALKSPHCGLETIGLSGCNLSGRSCAALSSVLSSQSSSLRDMDLSNNNLQDSGVKQ
LSAGLESPHCGLETLSLSACLITEEGCASLASALRSNPSHLRELDLSYNHPGDSGEKLLS
AGLKDPHWRLDTLRMDHGGLQRLKPGLRKYACELELDPNTMNRELKLSDNNRKVTHVKKD
QSYPDHPDRFDVYYQLLCRNVLTGRCYWEVEWRGDVSISVSYRRIRRKGASYDCVFGGND
QSWRLDCSADCRCFVWHNNKRTPISSSSSSSSSSSSVSNRVAVYVDCPAGTLSFYRVSSD
TLIHLHTFNTTFTQPLYAGFWVSKTINISITVSMFFISTVHIGYLLW
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgactggtctatggatcgtcctattgcgtttaaagatggacaacctgctgat
ggaaggatgcagcagcagagagcagactctcctgaacccagctgtgtgtccatgaagagt
gactggtctatgcctcgtcctattagctttaaagatggacaacctgctgatggaacgatg
cagcagcagagagcagactctcctgaacccagctgtgtgtccatgaagagtgacgggtct
atgtatgagcctcttacctttaaagatggacaacctgctgatggaagagttcagcagcag
agctcagaggttcccagtgatcagtctgcacagcagcatcaaacacagctggacgccata
tttatgctgctggaagagaacatcgtcacttttgtgaagaacgagctgaagagagtccag
aggggtctgagtcctgattacccagaatgcttaaagagtcagaatgaggataaggaggtg
ttggacggtgaggaggaagagcagaggaggagcagcagagacgcatttctgaagatcaca
ctgcatttcctgaggagaatgaagcaggaggatctggctgagcgtctgcagcgcagaact
cgtgctgcaaaatgtcgacgtaaactcaagtctaacctgcagaagaagttccagtgtctg
tttgaggggatcgctaaagcaggaaacccaacccttctgaatcagatctacacaccgctc
tacatcacaaagcgagggactgcagaggtcaatgatgaacatgaggtcagacagattgaa
acagcatccaggaaaccagacagaccagaaacaacaatcacacaagaagacatctttaaa
gcctcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcatt
gggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccag
gacatacacttcacatttccattcactttcagagagctgaatgtgctgaaagagaaaaag
tacagcttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgc
aggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcct
ctggacttccacaacaatgagatcctgactgatgttacagagtccacctcggtggatgtg
ctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccaca
cgacctgcagcagccaatcagatacctcctgagtgtttcagcatggtgacagaggtcaga
gggttcactgacccacagaaggaggagtacttcaggaagagattcagagatgagaagcag
gccagcaccatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatc
ccagtcttctgctggatcactgctacagttctggaggatgtgttgaaaagcagagaggga
ggagagctgcccaagaccctgactgagatgtacatccacttcctggtgcttcagtctaaa
ctgaagaacatcaagtatgaaggaggagctgagacagatccacactggagtccagagagc
aggaagatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctg
atcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtac
tcaggagtgttcacacaggtctttaaagaggagagagggttgtaccaggacaaggtgttc
tgcttcgtccatctgagccttcaggagtttctggctgctcttcatgtccatctgacattc
atcaagtctggagtcaatctgctggaagaagaacaaacaacatcctgctggtccaaagtc
tttaaagacaaaactaaaccaacacgtttctaccagagtgctgtggacgaggccttaaag
agtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagacc
aatcagactctcctacgaggtctgctgacacatacaggaagtagctcacagaccaatcag
gaaacagtccaatacatcaagaagaagatcagtgagaatctgtctgcagagagaagcatc
aatctgttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacag
tacctgagatcaggaagtctctccacagataaactgtctcctgctcagtggtcagctctg
ggcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactct
gcttcagaagaggctcttctgaggctgctgccagtggtcaaattctccaacaaagctctg
ttgagtgactgtaacctctcagagagaagctgtgcagctctgtcctcagttctcagctcc
cagtcttctagtctgagagatctggacctgagtaacaacgacctgccggattcaggagtg
aagcagctgtgtgatgcactgaagagtccacactgtggactggaaaccatcgggttgagt
ggctgtaacctctcagggagaagttgtgcagctctgtcctcagttctcagctcccagtcc
tctagtctgagagatatggacctgagtaacaacaacctgcaggattcaggagtgaagcag
ctttctgctggactggagagtccacactgtggactggaaactctcagcctgtcagcatgt
ctgatcacagaggaaggctgtgcttctctggcctcagctctgcgctccaacccctcccat
ttgagagagctggacctgagctacaatcatccaggagactcaggagagaagctgctgtct
gctggactgaaggatccacactggagactggacactctcaggatggaccatggtggactg
cagagactgaaacctggtctgaggaagtatgcctgtgaactggaactggatccaaacaca
atgaacagagaactcaaactgtctgataacaacaggaaggtgacacatgtgaagaaggat
cagtcatatcctgatcatccagacagatttgatgtctactatcagctgctgtgtagaaat
gttctgactggtcgctgttactgggaggtcgagtggagaggagacgtttctatatcagtg
agttacagaagaatcagaaggaaaggagccagttatgactgtgtgtttggagggaatgat
cagtcctggagactggactgctctgctgattgtcgttgctttgtctggcacaataacaaa
agaacacccatctcctcctcctcctcctcctcctcctcctcctcctctgtctctaacaga
gtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctctgac
acactgatccacctccacaccttcaacaccacattcactcagcctctgtatgctgggttt
tgggtctctaaaacaataaatatatccattactgttagtatgtttttcatatctactgtc
catattggatacctgctatggtag
DBGET
integrated database retrieval system
