Scomber scombrus (Atlantic mackerel): 133981112
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Entry
133981112 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133981112
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GFIT
Other DBs
NCBI-GeneID:
133981112
NCBI-ProteinID:
XP_062275981
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Position
5:34155981..34171716
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AA seq
970 aa
AA seq
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MFVSAVSVFRSRGASRLSLSFTCLQTRKRSSARKRVQQQSSEVPSDQSAQQHQTQLDSIF
MLLEENIVTFVKNELKRVQRGLSPDYPECLEGQSEDEEVLDGEEEEQRRSSREAFLKITV
HFLRRMKQEELAERFNMMERKWRQHGRGTRAAECQRKLKSNLEKKFQCLFEGIAKAGNPT
LLNQIYTPLYITEGGTAEVNDEHEIRQIETASRKPDRPETSIRQEDIFKASPGRDEPIRT
VMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHHFF
TETKEAGICRFEKFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLL
PSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQARTIISHIKTS
RSLHIMCHIPVFCWITATVLQDMLKSRKGGELPKTLTEMYIHFLVLQSKLKKVKYDGGAE
TDPHWSKKSRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVCSGVFTEVFKEE
RGLYQDKVFCFVHLSLQEFLAALHVHLTFIKSGVNLLAEEQTTSWSEVFGGKSARFYQSA
VDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSSSQTNQKTVEYIKKKIGENV
SAERSINLFHCLNELNDRSLVEEIQQSLRSGSLSTDKLSPAQWSALVFILLSSGKDLDVF
DLKKYSASEEALLRLLPVVKASNKALLSDCKLSERSCAALSSVLSSQSSSLRDLDLSNNN
LPDSGVKQLCAALESPNCTLEFSSLSGCNLSERSCAALSSVLSSQSSSLRDLDLSNNNLQ
DSGVKQLSAGLESPHCGLETLSLSGCLITEEGCASLASALNSNPSHLRELDLSYNHPGDS
GEKLLSAGLKDPHWRLDTLRMDHGGPQRLKPGLRKCECVFSLIHENFEKNWMKYVKEVKK
VQNDGKCVLS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtcagcagtttccgtcttcagaagcagaggagcgtcacgtctctctctctct
ttcacctgtctgcaaacacggaagagaagcagcgcgaggaagagagttcagcagcagagc
tcagaggttcccagtgatcagtctgcacagcagcatcaaacacagctggactccatattt
atgctgctggaggagaacattgtcacttttgtgaagaacgagctgaagagagtccagagg
ggtctgagtccagattacccagaatgcttagagggtcagagtgaggatgaggaggtgttg
gacggtgaggaggaagagcagaggaggagcagcagagaggcatttctgaagatcacagtg
cacttcctgaggagaatgaagcaggaggagctggctgagcgatttaacatgatggagagg
aaatggaggcaacatgggagaggaactcgtgctgcagagtgtcaacgtaaactcaagtct
aacctggagaagaagttccagtgtctgtttgaggggattgctaaagcaggaaacccaacc
cttctgaatcagatctacacaccgctctacatcacagagggagggactgcagaggtcaat
gatgaacatgagatcagacagattgaaacagcatccaggaaaccagacagaccagaaaca
tcaatcagacaagaagacatctttaaagcctcacctggaagagatgaaccaatcagaaca
gtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaagacaaagccaaccaggacatacacttcacatttccattcactttcaga
gagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcacttcttt
actgaaaccaaagaagcaggaatctgcaggtttgaaaagttccaggttgtgttcatcttt
gacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgactgat
gttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaactgctt
ccctctgctcgcctctggataaccacacgacctgcagccgccaatcagatccctcctgag
tgtgtcggcatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttc
aggaagagattcagagatgaggagcaggccagaaccatcatctcccacatcaagacatca
cgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctg
caggatatgttgaaaagcagaaagggaggagagctgcccaagaccctgactgagatgtac
atccacttcctggtgcttcagtccaaactgaagaaggtcaagtatgatggaggagctgag
acagatccacactggagtaagaagagcaggaagatgattgagtctctgggaaaactggct
tttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggc
atcgatatcagagcagcctcagtgtgctcaggagtgttcacagaggtctttaaagaagag
agagggctgtaccaggacaaggtgttctgcttcgtccatctgagccttcaggagtttctg
gctgctcttcatgtccatctgacattcatcaagtctggagtcaatctgctggcagaagaa
caaacaacatcctggtctgaagtgttcggaggcaaatcagcacgtttctaccagagtgct
gtggacgaggccttaaagagtccaaatggacacctggacttgttcctccgcttcctcctg
ggtctttcactgcagaccaatcagactctcctacgaggtctgctgacacagacaggaagt
agctcacagaccaatcagaaaacagtcgagtacatcaagaagaagatcggtgagaatgtg
tctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcgttctcta
gtggaggagatccaacagtccctgagatcaggaagtctctccacagataaactgtctcct
gctcagtggtcagctctggtcttcattttactgtcatcaggaaaagatctggacgtgttt
gacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaa
gcctccaacaaagctctgctgagtgactgtaagctctcagagagaagctgtgccgctctg
tcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaac
ttgccggattcaggagtgaagcagctgtgtgctgcactggagagtccaaactgtacactg
gaattttccagcttgagtggctgtaacctctcagagagaagctgtgcagctctgtcctca
gttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaacctgcag
gattcaggagtgaagcagctttctgctggactggagagtccacactgtggactggaaact
ctcagtctgtcaggatgtctgatcacagaggaaggctgtgcttctctggcctcagctctg
aactccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactca
ggagagaagcttctgtctgctggactgaaggatccacactggagactggacactctcagg
atggaccatggtggaccgcagagactgaaacctggtctgaggaagtgtgagtgtgttttc
agtttgattcatgagaactttgagaaaaactggatgaaatatgtaaaagaagtgaaaaaa
gttcaaaatgatggaaaatgtgttttgtcataa
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