Scomber scombrus (Atlantic mackerel): 133981316
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Entry
133981316 CDS
T10651
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03022
Basal transcription factors
Brite
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133981316
Coactivators
SAGA/TFTC/STAGA complex
133981316
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133981316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133981316
NCBI-ProteinID:
XP_062276007
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Position
1:complement(9469453..9559147)
Genome browser
AA seq
1033 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNPAGKTDANGGAGSVAPANHHIGK
TLPAPVGTTTLEQQQQGRRNKPEMRQDINSKDTSPDTTVPSPSLGCTPSLCEPSNTSSAC
VNASSSSGSQSHGASIKTLAASRGSTLASPPASISTAAGRGCKVAPGTGETSTEANLSRK
RISTPRRSASARIKSLNGAAVTTRRNSNTAVTETVSSVDTSAATTNSARPAVTSSINTST
FTLSNASLPAGRSAFALDRGTPTIALHRLPSHIVASIAQNGNGTSVSALVQQGARIGPIT
SSSSQGNHSKPLTDTGASKTDDCQSKIVMSSQSGGVNSVINTVSSVSSVTTPTTTTTTTI
TTAAAATTTTTTEPLSSTTAASGLTGVVTSTVCGTGQTTTVTTTTMSMVRPTAAFPTPAV
AATAQSQPRPGLTTAQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVP
QQALAQAQAQAQAQAQNNISPRPATPTTGASFRVTTPQKGPVAPAVAVTAPQQTPVVSAP
QAPAQAASQPVQPLQTGIAAAPGGPIVSQEMQENVKKCKNFLATLIKLASHNSPSPETSK
NVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQP
LQHGVKPAPGSTPPAIVAGPAVRIRHPNSISTTTGASALPAGTVGHAAAMGIKTVGAVSG
QVRMPVMITQSVRAQGTMGKGAAIQAGKSPVGLAVQISGNQKNKLNDPGGGSFRDDDDIN
DVASMAGVNLNEESARILATNSELVGTHIRSCKDEAFLHPGLLHRRILETAKKFGVTEVP
MEAVTFISHATQSRLRTVVEKVSTIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEK
QRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPR
KKRKVDSPGATPSGTEVSGSTAGSPASSSAPSTSLRQYTRQRITRVNLRDLIFYMEQERE
TAHSLLLYRALLK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtgagcgacctcgtaggctcattggagtcacagcttgccggccaaagcaacccagcgggt
aaaacagacgcaaacggaggcgctggctcggtggcccccgctaaccatcatataggaaaa
acgctgccagctccggtgggcaccacaacactggaacaacaacaacaaggacggcggaat
aaaccagagatgcgccaggatatcaactcgaaagacactagcccggatacaactgtcccc
tcaccttctctgggctgtacgccgtctctctgcgagccctccaacacctcctctgcctgt
gtgaacgccagcagcagcagcgggtcgcaatcacatggagcatccatcaaaacactggct
gcatctcgggggtcaactttggcatccccgccggccagcatcagcaccgcagccggccgg
ggatgtaaggttgccccgggcacaggtgagacgtcaacggaggctaacctgtcgaggaaa
cgcataagcacgccgcggaggagcgcttcagctcggataaagagtttgaacggcgcagct
gtaacgacgaggaggaacagcaacacggcggtgaccgaaaccgtcagctcagtggacacc
agtgcggctacaacaaactctgctcgaccggcggtgacatcctctattaacacttcgact
ttcaccttatccaacgccagtctgcctgcaggtcggtcggcttttgctctggaccggggg
actcctactatcgctctgcatagactccccagtcacattgtagcgagcatagcccaaaac
ggaaacgggaccagtgtttcggccttggtccagcagggcgctcgtataggacccatcacc
tcttcatcctcacaggggaaccacagcaaaccgctcacagacactggggcttccaaaaca
gacgattgtcagtccaaaattgtaatgtcaagccagtctggtggtgtcaactctgtaata
aacactgtctcctctgtgtcttctgttaccacaccaacaacaactactactactacaatt
actacagcagcagctgcaacaactacaacgacaaccgagcctctgagctcgaccacagct
gcttctggtcttactggggtggtaactagtactgtatgtggaactggtcaaactacaaca
gtgactactactactatgagcatggtcaggcccacagctgcctttccgacacctgctgtg
gccgccactgcacagtctcaaccccgtcctggacttacaacagctcaaaggattgtagca
ccgcagctcattgtcagaccacctcaacagcagacgaccattcagctaccccctgggttt
accatcccaccggggatggtgctggtgcgtacggagctgggccagctggtgatggttcct
cagcaggctttggctcaagcacaggctcaagctcaggctcaggcccagaacaacatctcc
ccacgacctgccacccccaccaccggtgcatccttcagagtaacgactccacagaagggc
cccgtggcaccggcggtggctgtgacggctccgcagcagacccccgtggttagtgcccca
caggccccggcccaggctgcctcccagccagtgcagcctctgcagacgggcatcgccgca
gcccccggaggtcctatcgtgtcccaggaaatgcaagagaatgtgaagaaatgtaagaat
ttcctggccacacttatcaagctggcatcccacaattcaccgtctccagagacttccaag
aacgtcaaggctctggttcaggacctgctggatgctaagatcgaacctgaggagtttacc
agccggctgcagactgagctcaaatcatctccacagccttacctggtgccctttctaaag
aagagcctcccggccctgcggctgtctttgctgaatagtcagcagtccctgacccagccc
ctgcagcatggagtcaaaccagcacccggcagcacccctcctgctattgtagctggacca
gctgtccgtatacgccaccctaacagcatcagcaccactacgggtgccagtgcgctgccc
gccgggacggtgggacatgcagctgccatgggtatcaagacagtgggtgctgtcagtggc
caggtccgcatgcctgtgatgatcacacagtctgtcagagcgcaaggcacaatggggaaa
ggagccgccatacaagcaggcaaaagtcccgtgggcttggctgttcagatctctgggaat
caaaaaaacaagctcaacgaccccggaggaggctctttcagggatgacgatgacatcaat
gacgtggcctccatggccggggtgaacctgaacgaggagagcgcaagaatactcgccact
aactcggagctggttggaacgcacattcgctcatgtaaagatgaggcctttctccacccg
ggactgctccaccgacgaattctggaaacagcaaagaagtttggagtaacggaagtcccc
atggaggcagtgacattcatctcacacgccacacagtcacgacttcgcactgtggtagaa
aaagtttctactatcgcacagcaccgactggactcctgtaaggatgatgagtgctacgag
cagtctgcagacgttcgctctcagcttcgcttcttcgagcagctggagagaatggagaag
cagaggaaggacgagcaggagagagagatcctgttgaaagccgctaaaagtcgctccagg
caagaggacccagagcaagctcgactgaaacagaaagctaaggagatgcaacagcaggaa
ctggcccagatgaggcagcgagatgccaaccttacagcactagcggccattggaccccgc
aaaaaacgcaaagtagattcaccgggggccaccccatcagggactgaggtttcaggcagc
acggcgggctccccggccagttcatccgccccgtccacctcattgcgccagtacacaagg
caacgcatcacccgcgtcaacctcagggacttaattttctacatggagcaggagagagag
accgcccactccctcctcctttaccgcgccctgctcaagtag
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