Scomber scombrus (Atlantic mackerel): 133981396
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Entry
133981396 CDS
T10651
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133981396
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
133981396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133981396
NCBI-ProteinID:
XP_062276034
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Position
6:complement(21523434..21570544)
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AA seq
760 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKELSKSIHEETVETFRTAKDPVVVQVIRRTPSGR
PHGPPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFMLSDSCHSLHTMDQDYY
EGTDYLSPVPADGERTEEFEYEEVELCRLSSQEKLGLTLCYRTDEEEDVAIYVSEISPNS
IAAKDGRIREGDRILQINGQDVQDREEAMAALSNEECRNILLLVARPEMQLEEAWLDDEH
SEFLEQLKMEMLEEQQREEMELAALQEEQENEQKEEDDKPTCSTLHHKDSVLSIKDRIEN
SEHNVLAHIQKRLSQCLRDNQDTHCITSSQGLEDKEDEDDEETEGDRFQQLLELKCQIRN
SGEYDLFYSRRSTIECSMGEQGGVQHELRMLNEELRSIELECQNIMQAHKLRMGQQSPTT
GHSAPSTKNQSLHQPTKGKLADINGRLEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSLQ
RMVSLTNQRNLCGGLATGHSLSPSPIPGCRAPILGKNSSPDHSNPSESDQTPQAEEERSR
KLKPCASQIPYFSPSHSSQQRQVNIPAHARHYQSYMQLIQQRSAVEYAQSQLSLLSVCKE
PQRPINEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAMSEMK
MGRYWSKEERKQHLLRAKEQRKRREFMQRSRLESLKENPQSSSEGRKEVSIIELSHKKMM
KKRNKKILDNWMTIQELMTHGTKAPEGAKVHNAFLSVTTV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctctgcactttacagaagcgagaggaacactacaagctgctgtatgag
attgcacaggtgaatgggaaagagttgtccaagtccatccatgaggagactgtggagacc
tttcgcactgccaaggaccccgtcgtggttcaggtcatcaggcggacccccagtggccga
ccccatggcccccctcaggaaatccatgtggtggatgtgtgcactcagactgacatcacc
tttgaacacatcatggcgctggcaaagctccggccttcaacccctcctgtgcctgacgtc
tgtcccttcatgctctctgacagctgtcattctctgcatacaatggaccaggattactat
gaagggacagattacctctcccctgttccagcggatggagagaggacagaggagtttgaa
tatgaggaagtggaattgtgtcgactcagcagccaagagaagttggggctaactctgtgc
tataggacagatgaggaagaggatgtggccatctatgtcagtgagatcagtccaaacagc
atcgctgccaaagacggacgcatccgagagggggatcgcattttacagattaatggtcaa
gatgtgcaggacagagaggaagcaatggctgcactctccaatgaagagtgcaggaacatc
ttactgctggttgccagacctgagatgcagctggaggaggcctggctggatgatgagcac
agtgagttcctggagcagctgaagatggaaatgttggaggagcagcagagagaggagatg
gaattggctgcccttcaggaggagcaggaaaatgaacagaaagaagaagatgacaagccc
acctgctccacactgcatcataaggacagtgtactgagtatcaaagacagaattgagaac
tcagagcataatgtcctggcacacatccaaaaacgtctgtcccagtgcctgagagacaat
caggacacacattgtatcaccagctcccaagggttggaggacaaagaggatgaagacgat
gaggaaacagagggtgatcgtttccagcagctcttggagctgaagtgtcagattcgaaac
agcggtgagtacgacctgttctacagccgccgcagcaccattgagtgcagcatgggggag
cagggtggcgtacaacacgagctacgcatgctcaacgaggagctgcgcagcatcgagctt
gaatgtcagaacatcatgcaggcccacaagcttcgtatgggccagcagtctcctaccaca
ggccactctgccccctccaccaaaaaccaaagcctccatcagccaacaaagggtaaactg
gcagacattaatgggaggctggaaaaatcggacaaggacagctccagtgcctataatacg
gcggagagttcacggagcacccccttggcaatggatcgctccccagagcactcgctccag
aggatggtcagtctcaccaaccagagaaacctctgcggtggccttgccactggccactca
cttagcccgagccccatcccaggatgccgtgctccaatcttgggcaagaacagcagccct
gaccacagcaatccttctgagtcagaccagacacctcaggctgaggaggaaaggagtaga
aaattaaagccatgtgcttcccagattccttacttctccccctcccacagctcccagcaa
cgacaggtcaacatcccagctcatgcccgccactaccagagctacatgcagctgatccag
cagcgttcagctgtagagtatgcccagagccagctcagcctgctcagtgtctgcaaagag
cctcagaggcccattaatgagcccaagatggagtggaaggtaaagatccgcagtgacggc
acacgctacatcaccaagaggcctgtgagagacaagatcctgagggagcgagcactaaag
attaaagaagagcgtagtgggggaatgaccacggatgacgatgcaatgagtgaaatgaag
atggggaggtactggagcaaagaggaaagaaagcagcacctgctcagggcaaaggaacag
aggaaaagacgagagttcatgcagcgcagtcggctggaaagtttgaaggagaaccctcag
agcagcagcgagggtcgaaaggaagtcagcattattgagctcagccacaaaaagatgatg
aaaaaacgcaacaagaagatcctggacaactggatgaccatccaggagctgatgacccat
ggtactaaggcccctgagggagccaaggttcacaacgccttcttatcagtcactactgta
taa
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